Best Alignments for T0291

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1jpaA/T0291-1jpaA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1jpaA/T0291-1jpaA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.3415e-585.75e-183 d.144.1.7
1ywnA/T0291-1ywnA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ywnA/T0291-1ywnA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.9631e-531.19e-151
1xbbA/T0291-1xbbA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xbbA/T0291-1xbbA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.7979e-523.15e-155
2b7aA/T0291-2b7aA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2b7aA/T0291-2b7aA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.7402e-482.05e-147
1fmk/T0291-1fmk-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1fmk/T0291-1fmk-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.6900e-432.86e-158 1fmk b.34.2.1
d.93.1.1
d.144.1.7
2evaA/T0291-2evaA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2evaA/T0291-2evaA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.0451e-425.05e-120
2f57A/T0291-2f57A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2f57A/T0291-2f57A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.7409e-321.04e-105
1yhvA/T0291-1yhvA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1yhvA/T0291-1yhvA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.2920e-326.13e-100
1xjdA/T0291-1xjdA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xjdA/T0291-1xjdA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.5197e-311.62e-95
2bfxA/T0291-2bfxA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2bfxA/T0291-2bfxA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.4177e-313.07e-107

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001