Best Alignments for T0290

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1dywA/T0290-1dywA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1dywA/T0290-1dywA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0711e-299.65e-100 2cpl b.62.1.1
1ihgA/T0290-1ihgA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ihgA/T0290-1ihgA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0797e-296.07e-98 2cpl a.118.8.1
b.62.1.1
1yndA/T0290-1yndA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1yndA/T0290-1yndA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.4121e-294.28e-98
2bitX/T0290-2bitX-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2bitX/T0290-2bitX-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.3509e-211.81e-98
1xo7A/T0290-1xo7A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xo7A/T0290-1xo7A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.3363e-201.77e-96
1zcxA/T0290-1zcxA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1zcxA/T0290-1zcxA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.9107e-204.06e-97
2cfeA/T0290-2cfeA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2cfeA/T0290-2cfeA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.0360e-201.53e-94
1vdnA/T0290-1vdnA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vdnA/T0290-1vdnA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4827e-191.87e-92
1zkcA/T0290-1zkcA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1zkcA/T0290-1zkcA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.6182e-192.14e-90
2a2nA/T0290-2a2nA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2a2nA/T0290-2a2nA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2794e-186.98e-93

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001