Best Alignments for T0289

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
2bcoA/T0289-2bcoA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2bcoA/T0289-2bcoA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.5109e-182.13e-94
1yw4A/T0289-1yw4A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1yw4A/T0289-1yw4A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.6089e-165.41e-77
1dtdA/T0289-1dtdA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1dtdA/T0289-1dtdA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.3138e-133.51e-66 1aye c.56.5.1
1h8lA/T0289-1h8lA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1h8lA/T0289-1h8lA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.3334e-107.18e-78 b.3.2.1
c.56.5.1
2bo9A/T0289-2bo9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2bo9A/T0289-2bo9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.0361e-072.60e-72
2c1cA/T0289-2c1cA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2c1cA/T0289-2c1cA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.8591e-071.75e-64
1z5rA/T0289-1z5rA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1z5rA/T0289-1z5rA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.0439e-069.81e-70
1jqgA/T0289-1jqgA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1jqgA/T0289-1jqgA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.1931e-061.95e-59 c.56.5.1
d.58.3.1
1obr/T0289-1obr-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1obr/T0289-1obr-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.1578e-053.16e-57 1aye c.56.5.2
1yw6A/T0289-1yw6A-t2k-global-adpstyle1.a2m 1yw6A/T0289-1yw6A-t2k-global-adpstyle1.al 9.7071e-043.02e-81

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001