Best Alignments for T0289

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
2bcoA/T0289-2bcoA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2bcoA/T0289-2bcoA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2447e-312.13e-94
1yw4A/T0289-1yw4A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1yw4A/T0289-1yw4A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0026e-255.41e-77
1yw6A/T0289-1yw6A-t2k-global-adpstyle1.a2m 1yw6A/T0289-1yw6A-t2k-global-adpstyle1.al 1.8497e-143.02e-81
2g9dA/T0289-2g9dA-t2k-global-adpstyle1.a2m 2g9dA/T0289-2g9dA-t2k-global-adpstyle1.al 1.0485e-132.48e-77
1h8lA/T0289-1h8lA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1h8lA/T0289-1h8lA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.8180e-059.41e-30 b.3.2.1
c.56.5.1
2bo9A/T0289-2bo9A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2bo9A/T0289-2bo9A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.0854e-031.53e-25
1jqgA/T0289-1jqgA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1jqgA/T0289-1jqgA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.7514e-031.34e-22 c.56.5.1
d.58.3.1
2c1cA/T0289-2c1cA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2c1cA/T0289-2c1cA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.3899e-022.28e-16
1dtdA/T0289-1dtdA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1dtdA/T0289-1dtdA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.4058e-021.84e-22 1aye c.56.5.1
1z5rA/T0289-1z5rA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1z5rA/T0289-1z5rA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.9067e-018.08e-18

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001