Best Alignments for T0287

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1b0b/T0287-1b0b-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1b0b/T0287-1b0b-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1930e+015.56e-01 2fal a.1.1.2
1josA/T0287-1josA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1josA/T0287-1josA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.3869e+013.92e-04 d.52.7.1
1tmxA/T0287-1tmxA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1tmxA/T0287-1tmxA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.4198e+011.77e-07
1dc1A/T0287-1dc1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1dc1A/T0287-1dc1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.0842e+011.70e-09 1dc1A c.52.1.11
2a9kB/T0287-2a9kB-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2a9kB/T0287-2a9kB-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.1906e+012.29e-05
1g24A/T0287-1g24A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1g24A/T0287-1g24A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.4286e+014.36e-05 1g24A d.166.1.1
2sas/T0287-2sas-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2sas/T0287-2sas-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.7948e+012.33e+00 2sas a.39.1.5
1knqA/T0287-1knqA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1knqA/T0287-1knqA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.2754e+012.77e-05 c.37.1.17
1sz9A/T0287-1sz9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1sz9A/T0287-1sz9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.3355e+015.80e-08 a.118.9.4
1e9gA/T0287-1e9gA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1e9gA/T0287-1e9gA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.4467e+018.55e-01 1wgjA b.40.5.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001