Best Alignments for T0287

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
2a9kB/T0287-2a9kB-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2a9kB/T0287-2a9kB-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.5667e+012.26e-04
2sas/T0287-2sas-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2sas/T0287-2sas-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.0516e+012.30e+01 2sas a.39.1.5
1g24A/T0287-1g24A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1g24A/T0287-1g24A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.4710e+014.30e-04 1g24A d.166.1.1
1qspA/T0287-1qspA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1qspA/T0287-1qspA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.5162e+012.47e-07 1qspA a.24.10.2
1sz9A/T0287-1sz9A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1sz9A/T0287-1sz9A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.6473e+015.72e-07 a.118.9.4
1josA/T0287-1josA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1josA/T0287-1josA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.0189e+013.87e-03 d.52.7.1
1flp/T0287-1flp-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1flp/T0287-1flp-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.2122e+011.73e+00 1flp a.1.1.2
1qdbA/T0287-1qdbA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1qdbA/T0287-1qdbA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.5361e+014.83e-05 1qdbA a.138.1.3
2cunA/T0287-2cunA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2cunA/T0287-2cunA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.7149e+017.87e-03
2cz1A/T0287-2cz1A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2cz1A/T0287-2cz1A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.8157e+017.34e-06

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001