Best Alignments for T0286

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1ivnA/T0286-1ivnA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ivnA/T0286-1ivnA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.5627e-153.01e-74 c.23.10.5
1yzfA/T0286-1yzfA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1yzfA/T0286-1yzfA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2117e-141.65e-75
1wab/T0286-1wab-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wab/T0286-1wab-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.1253e-133.47e-63 1wab c.23.10.3
1vjgA/T0286-1vjgA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vjgA/T0286-1vjgA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.1598e-129.55e-70 c.23.10.6
1k7cA/T0286-1k7cA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1k7cA/T0286-1k7cA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.8217e-113.53e-58 c.23.10.4
1esc/T0286-1esc-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1esc/T0286-1esc-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2071e-101.71e-71 1esc c.23.10.1
1zmbA/T0286-1zmbA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1zmbA/T0286-1zmbA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.5236e-061.30e-46
2apjA/T0286-2apjA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2apjA/T0286-2apjA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.6818e-031.62e-44
1udc/T0286-1udc-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1udc/T0286-1udc-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.8336e-023.59e-29 1xel c.2.1.2
1vbuA/T0286-1vbuA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vbuA/T0286-1vbuA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.7284e-022.38e-27

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001