Best Alignments for T0285

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1kum/T0285-1kum-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1kum/T0285-1kum-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.3657e+011.78e-01 1kum b.3.1.1
1ebfA/T0285-1ebfA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ebfA/T0285-1ebfA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.3688e+014.40e-06 1ebuA c.2.1.3
d.81.1.2
1v8fA/T0285-1v8fA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1v8fA/T0285-1v8fA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.2980e+015.41e-07 c.26.1.4
1d8iA/T0285-1d8iA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1d8iA/T0285-1d8iA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.4202e+016.92e-01 1d8iA d.63.1.1
1e19A/T0285-1e19A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1e19A/T0285-1e19A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.8447e+011.76e-04 1b7bA c.73.1.1
1y6hA/T0285-1y6hA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1y6hA/T0285-1y6hA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.8730e+013.00e-02
2lao/T0285-2lao-t2k-local-adpstyle1.a2m 2lao/T0285-2lao-t2k-local-adpstyle1.al 2.9191e+018.13e+00 1lst c.94.1.1
2b18A/T0285-2b18A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2b18A/T0285-2b18A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.0828e+012.03e-04
2cyeA/T0285-2cyeA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2cyeA/T0285-2cyeA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.0957e+012.97e-02
1fjrA/T0285-1fjrA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1fjrA/T0285-1fjrA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.2137e+011.49e-02 1fjrA b.102.1.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001