Best Alignments for T0285

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1qg0A/T0285-1qg0A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1qg0A/T0285-1qg0A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.9700e+009.55e+03 1fnc b.43.4.2
c.25.1.1
2lao/T0285-2lao-t04-local-adpstyle1.a2m 2lao/T0285-2lao-t04-local-adpstyle1.al 6.7648e+005.91e+00 1lst c.94.1.1
1t8cA/T0285-1t8cA-t04-global-adpstyle1.a2m 1t8cA/T0285-1t8cA-t04-global-adpstyle1.al 1.0807e+017.53e-02
1fjrA/T0285-1fjrA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1fjrA/T0285-1fjrA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.6104e+011.07e-02 1fjrA b.102.1.1
2a59A/T0285-2a59A-t04-global-adpstyle1.a2m 2a59A/T0285-2a59A-t04-global-adpstyle1.al 1.6560e+016.74e-01
1kyyA/T0285-1kyyA-t04-global-adpstyle1.a2m 1kyyA/T0285-1kyyA-t04-global-adpstyle1.al 1.7040e+016.53e-01 c.16.1.1
1bawA/T0285-1bawA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1bawA/T0285-1bawA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.8500e+018.84e+00 1plc b.6.1.1
1ifrA/T0285-1ifrA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ifrA/T0285-1ifrA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.2366e+011.06e-01 b.1.16.1
1iq3A/T0285-1iq3A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1iq3A/T0285-1iq3A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.3100e+017.04e+01 1iq3A a.39.1.6
1ebfA/T0285-1ebfA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ebfA/T0285-1ebfA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.4122e+013.22e-06 1ebuA c.2.1.3
d.81.1.2

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001