Best Alignments for T0284

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1s2wA/T0284-1s2wA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1s2wA/T0284-1s2wA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.1785e-275.41e-128 c.1.12.7
1xg4A/T0284-1xg4A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xg4A/T0284-1xg4A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.0801e-215.03e-158
1o66A/T0284-1o66A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1o66A/T0284-1o66A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.6562e-192.89e-98 c.1.12.8
1gvfA/T0284-1gvfA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1gvfA/T0284-1gvfA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.1677e-079.83e-54 c.1.10.2
1zlpA/T0284-1zlpA-t2k-global-adpstyle1.a2m 1zlpA/T0284-1zlpA-t2k-global-adpstyle1.al 9.9961e-065.03e-82
1rvkA/T0284-1rvkA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1rvkA/T0284-1rvkA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.7854e-058.63e-36 c.1.11.2
d.54.1.1
1o5kA/T0284-1o5kA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1o5kA/T0284-1o5kA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.6721e-042.88e-33 c.1.10.1
1q7zA/T0284-1q7zA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1q7zA/T0284-1q7zA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.1156e-041.22e-38 c.1.21.2
c.1.26.1
1ad1A/T0284-1ad1A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ad1A/T0284-1ad1A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.9772e-031.03e-34 1aj2 c.1.21.1
1a53/T0284-1a53-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1a53/T0284-1a53-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.2835e-031.38e-37 1a53 c.1.2.4

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001