Best Alignments for T0284

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1mumA/T0284-1mumA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1mumA/T0284-1mumA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.6660e-302.31e-158 c.1.12.7
1xg4A/T0284-1xg4A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xg4A/T0284-1xg4A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.6827e-285.03e-158
1zlpA/T0284-1zlpA-t2k-global-adpstyle1.a2m 1zlpA/T0284-1zlpA-t2k-global-adpstyle1.al 3.9095e-095.03e-82
1m3uA/T0284-1m3uA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1m3uA/T0284-1m3uA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.9953e-072.01e-57 c.1.12.8
1hl2A/T0284-1hl2A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1hl2A/T0284-1hl2A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0735e-042.67e-43 c.1.10.1
1gvfA/T0284-1gvfA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1gvfA/T0284-1gvfA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.5603e-041.02e-37 c.1.10.2
1xkyA/T0284-1xkyA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xkyA/T0284-1xkyA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.7157e-044.27e-38
1rd5A/T0284-1rd5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1rd5A/T0284-1rd5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.9010e-041.05e-34
1xm3A/T0284-1xm3A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xm3A/T0284-1xm3A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1416e-039.00e-29
1w8sA/T0284-1w8sA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1w8sA/T0284-1w8sA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.4768e-031.32e-33

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001