Best Alignments for T0284

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1s2wA/T0284-1s2wA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1s2wA/T0284-1s2wA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.9865e-357.14e-117 c.1.12.7
1o66A/T0284-1o66A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1o66A/T0284-1o66A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2293e-332.89e-98 c.1.12.8
1gvfA/T0284-1gvfA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1gvfA/T0284-1gvfA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.8630e-129.83e-54 c.1.10.2
1rvkA/T0284-1rvkA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1rvkA/T0284-1rvkA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.5956e-083.97e-35 c.1.11.2
d.54.1.1
1q7zA/T0284-1q7zA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1q7zA/T0284-1q7zA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.0504e-061.22e-38 c.1.21.2
c.1.26.1
1nvmA/T0284-1nvmA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1nvmA/T0284-1nvmA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.8108e-051.54e-44 a.5.7.1
c.1.10.5
1gqnA/T0284-1gqnA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1gqnA/T0284-1gqnA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.6375e-051.53e-33 c.1.10.1
1ad1A/T0284-1ad1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ad1A/T0284-1ad1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.7551e-054.87e-33 1aj2 c.1.21.1
1rhcA/T0284-1rhcA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1rhcA/T0284-1rhcA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.0497e-051.83e-20 c.1.16.3
1a53/T0284-1a53-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1a53/T0284-1a53-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.6229e-041.38e-37 1a53 c.1.2.4

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001