Best Alignments for T0284

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1xg4A/T0284-1xg4A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xg4A/T0284-1xg4A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.0984e-271.84e-140
1mumA/T0284-1mumA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1mumA/T0284-1mumA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.7616e-277.37e-142 c.1.12.7
1m3uA/T0284-1m3uA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1m3uA/T0284-1m3uA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.9530e-225.81e-100 c.1.12.8
1zlpA/T0284-1zlpA-t04-global-adpstyle1.a2m 1zlpA/T0284-1zlpA-t04-global-adpstyle1.al 3.0332e-153.00e-72
1gvfA/T0284-1gvfA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1gvfA/T0284-1gvfA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.0193e-051.71e-45 c.1.10.2
1vhnA/T0284-1vhnA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vhnA/T0284-1vhnA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.9725e-054.59e-30 c.1.4.1
1hl2A/T0284-1hl2A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1hl2A/T0284-1hl2A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0277e-044.36e-47 c.1.10.1
1xm3A/T0284-1xm3A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xm3A/T0284-1xm3A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.1854e-043.17e-33
1rd5A/T0284-1rd5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1rd5A/T0284-1rd5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.0099e-042.93e-40
1b4kA/T0284-1b4kA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1b4kA/T0284-1b4kA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.4361e-041.73e-38 1b4kA c.1.10.3

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001