Best Alignments for T0283

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1tffA/T0283-1tffA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1tffA/T0283-1tffA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.2723e-011.94e-05 d.3.1.11
1nd6A/T0283-1nd6A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1nd6A/T0283-1nd6A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.8307e+008.87e-10 c.60.1.2
1tx4A/T0283-1tx4A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1tx4A/T0283-1tx4A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.7584e+002.36e-03 1tx4A a.116.1.1
1sheA/T0283-1sheA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1sheA/T0283-1sheA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.1286e+001.46e-03 d.274.1.1
1w2yA/T0283-1w2yA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1w2yA/T0283-1w2yA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1279e+011.29e-05 a.204.1.1
1csn/T0283-1csn-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1csn/T0283-1csn-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1522e+014.76e-05 1csn d.144.1.7
2ex3B/T0283-2ex3B-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2ex3B/T0283-2ex3B-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2062e+014.95e-05
1mojA/T0283-1mojA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1mojA/T0283-1mojA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4936e+014.13e-03 a.25.1.1
1colA/T0283-1colA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1colA/T0283-1colA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4965e+011.32e-03 1a87 f.1.1.1
1tjoA/T0283-1tjoA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1tjoA/T0283-1tjoA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.5497e+018.75e-03

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001