Best Alignments for T0386

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
2g03A/T0386-2g03A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2g03A/T0386-2g03A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.1498e-195.98e-68
2f6sA/T0386-2f6sA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2f6sA/T0386-2f6sA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4400e-165.02e-64
1d5rA/T0386-1d5rA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1d5rA/T0386-1d5rA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.4947e-011.31e-14 1d5rA b.7.1.1
c.45.1.1
1exrA/T0386-1exrA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1exrA/T0386-1exrA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.1908e-011.03e-11 1cll a.39.1.5
2b3oA/T0386-2b3oA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2b3oA/T0386-2b3oA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1900e+002.67e-12
1g8lA/T0386-1g8lA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1g8lA/T0386-1g8lA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2026e+001.18e-11 1g8lA b.85.6.1
b.103.1.1
c.57.1.2
2f3yA/T0386-2f3yA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2f3yA/T0386-2f3yA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2976e+001.52e-11
1nh1A/T0386-1nh1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1nh1A/T0386-1nh1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4905e+001.67e-19 e.45.1.1
2fnaA/T0386-2fnaA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fnaA/T0386-2fnaA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.3670e+007.71e-14
1ywfA/T0386-1ywfA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ywfA/T0386-1ywfA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.5043e+001.67e-13

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001