Best Alignments for T0386

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
2g03A/T0386-2g03A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2g03A/T0386-2g03A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4637e-194.27e-69
2f6sA/T0386-2f6sA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2f6sA/T0386-2f6sA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4622e-174.82e-63
1d5rA/T0386-1d5rA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1d5rA/T0386-1d5rA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.5667e-022.36e-15 1d5rA b.7.1.1
c.45.1.1
1g8lA/T0386-1g8lA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1g8lA/T0386-1g8lA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1034e+004.75e-10 1g8lA b.85.6.1
b.103.1.1
c.57.1.2
1exrA/T0386-1exrA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1exrA/T0386-1exrA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4796e+002.16e-08 1cll a.39.1.5
1pi1A/T0386-1pi1A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1pi1A/T0386-1pi1A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.4975e+002.86e-13 a.29.7.1
1r2rA/T0386-1r2rA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1r2rA/T0386-1r2rA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.1127e+004.38e-05 c.1.1.1
2fnaA/T0386-2fnaA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fnaA/T0386-2fnaA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.2103e+001.25e-11
2f3yA/T0386-2f3yA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2f3yA/T0386-2f3yA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.9897e+005.06e-09
1y1xA/T0386-1y1xA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1y1xA/T0386-1y1xA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.7980e+002.79e-12

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001