Best Alignments for T0386

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1i9sA/T0386-1i9sA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1i9sA/T0386-1i9sA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.4518e+004.95e+03 1i9sA c.45.1.1
2c46A/T0386-2c46A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2c46A/T0386-2c46A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.8654e+005.81e+03
1jecA/T0386-1jecA-t06-local-adpstyle1.a2m 1jecA/T0386-1jecA-t06-local-adpstyle1.al 1.0426e+011.71e+01 b.122.1.3
c.26.1.5
c.37.1.15
2g3mA/T0386-2g3mA-t06-local-adpstyle1.a2m 2g3mA/T0386-2g3mA-t06-local-adpstyle1.al 1.9745e+014.19e+01
1lkxA/T0386-1lkxA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1lkxA/T0386-1lkxA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.0209e+014.27e+02 c.37.1.9
1x3xA/T0386-1x3xA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1x3xA/T0386-1x3xA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.1929e+012.54e-01
1ypqA/T0386-1ypqA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ypqA/T0386-1ypqA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.2120e+013.40e-03
2grjA/T0386-2grjA-t06-global-adpstyle1.a2m 2grjA/T0386-2grjA-t06-global-adpstyle1.al 2.2942e+014.20e+00
1r6xA/T0386-1r6xA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1r6xA/T0386-1r6xA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.3386e+011.47e+01 b.122.1.3
c.26.1.5
1e6vA/1mroA-T0386-fssp-local-adpstyle5.a2m 1e6vA/1mroA-T0386-fssp-local-adpstyle5.al 2.3508e+018.46e+02 1mroA a.89.1.1
d.58.31.2

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001