Best Alignments for T0386

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1g8fA/T0386-1g8fA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1g8fA/T0386-1g8fA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.6700e+002.61e+01 1g8fA b.122.1.3
c.26.1.5
c.37.1.15
1i9sA/T0386-1i9sA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1i9sA/T0386-1i9sA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.5000e+004.95e+03 1i9sA c.45.1.1
1r6xA/T0386-1r6xA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1r6xA/T0386-1r6xA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0657e+011.68e+01 b.122.1.3
c.26.1.5
2c46A/T0386-2c46A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2c46A/T0386-2c46A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0763e+015.81e+03
1kxrA/T0386-1kxrA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1kxrA/T0386-1kxrA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1900e+011.13e+03 d.3.1.3
1ypqA/T0386-1ypqA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ypqA/T0386-1ypqA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4246e+013.40e-03
2d0sA/T0386-2d0sA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2d0sA/T0386-2d0sA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4324e+014.48e+00
2g3mA/T0386-2g3mA-t06-local-adpstyle1.a2m 2g3mA/T0386-2g3mA-t06-local-adpstyle1.al 1.5484e+014.19e+01
1dmhA/T0386-1dmhA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1dmhA/T0386-1dmhA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.5675e+013.23e+03 1dmhA b.3.6.1
1zbsA/T0386-1zbsA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1zbsA/T0386-1zbsA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.6607e+012.07e+01

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001