Best Alignments for T0386

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1y14B/T0386-1y14B-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1y14B/T0386-1y14B-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1489e+007.62e-12
1c9oA/T0386-1c9oA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1c9oA/T0386-1c9oA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.4363e+002.57e-07 1mjc b.40.4.5
1dhn/T0386-1dhn-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1dhn/T0386-1dhn-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.1697e+004.22e-03 1dhn d.96.1.3
2d9rA/T0386-2d9rA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2d9rA/T0386-2d9rA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.1738e+003.85e-08
1zq1A/T0386-1zq1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1zq1A/T0386-1zq1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.3953e+002.50e-06
2h6lA/T0386-2h6lA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2h6lA/T0386-2h6lA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.2455e+003.38e-03
1fr3A/T0386-1fr3A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1fr3A/T0386-1fr3A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.0393e+001.80e-04 1fr3A b.40.6.1
1wjnA/T0386-1wjnA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wjnA/T0386-1wjnA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.4408e+002.83e-06
1khoA/T0386-1khoA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1khoA/T0386-1khoA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.7186e+003.26e-03 a.124.1.1
b.12.1.3
2d6fA/T0386-2d6fA-t06-global-adpstyle1.a2m 2d6fA/T0386-2d6fA-t06-global-adpstyle1.al 8.1599e+007.42e-01

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001