Best Alignments for T0386

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1y14B/T0386-1y14B-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1y14B/T0386-1y14B-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2645e+002.57e-11
1c9oA/T0386-1c9oA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1c9oA/T0386-1c9oA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.8667e+002.57e-07 1mjc b.40.4.5
2d9rA/T0386-2d9rA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2d9rA/T0386-2d9rA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.9987e+005.53e-08
2h6lA/T0386-2h6lA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2h6lA/T0386-2h6lA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.1097e+003.38e-03
1dhn/T0386-1dhn-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1dhn/T0386-1dhn-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.1124e+003.90e+01 1dhn d.96.1.3
1fr3A/T0386-1fr3A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1fr3A/T0386-1fr3A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.2345e+005.59e-03 1fr3A b.40.6.1
2fwkA/T0386-2fwkA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fwkA/T0386-2fwkA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.7339e+001.23e-05
1khoA/T0386-1khoA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1khoA/T0386-1khoA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.2707e+003.26e-03 a.124.1.1
b.12.1.3
1jpeA/T0386-1jpeA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1jpeA/T0386-1jpeA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.4100e+006.80e+03 b.1.17.1
1ts9A/T0386-1ts9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ts9A/T0386-1ts9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.7238e+009.68e+02

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001