Best Alignments for T0386

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1y14B/T0386-1y14B-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1y14B/T0386-1y14B-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1810e+007.62e-12
1c9oA/T0386-1c9oA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1c9oA/T0386-1c9oA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.7635e+004.24e-07 1mjc b.40.4.5
1zq1A/T0386-1zq1A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1zq1A/T0386-1zq1A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.4265e+002.45e-04
2d9rA/T0386-2d9rA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2d9rA/T0386-2d9rA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.8591e+002.09e-06
1dhn/T0386-1dhn-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1dhn/T0386-1dhn-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.9468e+004.70e+00 1dhn d.96.1.3
2h6lA/T0386-2h6lA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2h6lA/T0386-2h6lA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.1391e+002.92e-02
1fr3A/T0386-1fr3A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1fr3A/T0386-1fr3A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.6715e+006.22e-03 1fr3A b.40.6.1
1wjnA/T0386-1wjnA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wjnA/T0386-1wjnA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.8451e+006.73e-06
2fwkA/T0386-2fwkA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fwkA/T0386-2fwkA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.6791e+003.98e-06
1jpeA/T0386-1jpeA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1jpeA/T0386-1jpeA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.1600e+003.10e+02 b.1.17.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001