Best Alignments for T0386

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
2g03A/T0386-2g03A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2g03A/T0386-2g03A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.5344e-181.05e-66
2f6sA/T0386-2f6sA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2f6sA/T0386-2f6sA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.7814e-181.36e-62
1d5rA/T0386-1d5rA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1d5rA/T0386-1d5rA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.6074e-012.70e-17 1d5rA b.7.1.1
c.45.1.1
1exrA/T0386-1exrA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1exrA/T0386-1exrA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.5826e+003.21e-14 1cll a.39.1.5
1f16A/T0386-1f16A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1f16A/T0386-1f16A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.7497e+003.24e-10 1f16A f.1.4.1
1g8lA/T0386-1g8lA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1g8lA/T0386-1g8lA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.0471e+002.14e-07 1g8lA b.85.6.1
b.103.1.1
c.57.1.2
1sxjE/T0386-1sxjE-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1sxjE/T0386-1sxjE-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.1886e+001.27e-13 a.80.1.1
c.37.1.20
1nh1A/T0386-1nh1A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1nh1A/T0386-1nh1A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.5669e+002.95e-18 e.45.1.1
1z2nX/T0386-1z2nX-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1z2nX/T0386-1z2nX-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.0951e+002.04e-09
2b3oA/T0386-2b3oA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2b3oA/T0386-2b3oA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.1330e+001.35e-13

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001