Best Alignments for T0386

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
2g03A/T0386-2g03A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2g03A/T0386-2g03A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4017e-184.50e-53
2f6sA/T0386-2f6sA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2f6sA/T0386-2f6sA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.4466e-188.92e-51
1d5rA/T0386-1d5rA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1d5rA/T0386-1d5rA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.4232e-029.13e-10 1d5rA b.7.1.1
c.45.1.1
1sxjE/T0386-1sxjE-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1sxjE/T0386-1sxjE-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.0502e+001.27e-13 a.80.1.1
c.37.1.20
1f16A/T0386-1f16A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1f16A/T0386-1f16A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.5430e+003.98e-07 1f16A f.1.4.1
1y5eA/T0386-1y5eA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1y5eA/T0386-1y5eA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.5176e+006.48e-05
1j98A/T0386-1j98A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1j98A/T0386-1j98A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.0796e+004.25e-07 1j98A d.185.1.2
2cqjA/T0386-2cqjA-t2k-local-adpstyle1.a2m 2cqjA/T0386-2cqjA-t2k-local-adpstyle1.al 6.0898e+003.44e+00
2bgxA/T0386-2bgxA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2bgxA/T0386-2bgxA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.5073e+008.87e-03
2bh7A/T0386-2bh7A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2bh7A/T0386-2bh7A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0377e+014.86e-02

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001