Best Alignments for T0386

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
2g03A/T0386-2g03A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2g03A/T0386-2g03A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.5170e-181.05e-66
2f6sA/T0386-2f6sA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2f6sA/T0386-2f6sA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.6800e-161.36e-62
1d5rA/T0386-1d5rA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1d5rA/T0386-1d5rA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.7589e-022.70e-17 1d5rA b.7.1.1
c.45.1.1
1exrA/T0386-1exrA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1exrA/T0386-1exrA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2146e+003.21e-14 1cll a.39.1.5
1g8lA/T0386-1g8lA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1g8lA/T0386-1g8lA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.5665e+003.90e-07 1g8lA b.85.6.1
b.103.1.1
c.57.1.2
1z2nX/T0386-1z2nX-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1z2nX/T0386-1z2nX-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.3221e+002.04e-09
2f3yA/T0386-2f3yA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2f3yA/T0386-2f3yA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.6021e+004.14e-10
1nh1A/T0386-1nh1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1nh1A/T0386-1nh1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.6564e+004.06e-17 e.45.1.1
1ywfA/T0386-1ywfA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ywfA/T0386-1ywfA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.8727e+002.76e-08
1u00A/T0386-1u00A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1u00A/T0386-1u00A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.1310e+002.09e-07

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001