Best Alignments for T0386

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
2g03A/T0386-2g03A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2g03A/T0386-2g03A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.1026e-191.74e-60
2f6sA/T0386-2f6sA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2f6sA/T0386-2f6sA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.2815e-181.83e-57
1nh1A/T0386-1nh1A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1nh1A/T0386-1nh1A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.2071e-012.95e-18 e.45.1.1
1exrA/T0386-1exrA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1exrA/T0386-1exrA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4645e+001.48e-10 1cll a.39.1.5
1d5rA/T0386-1d5rA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1d5rA/T0386-1d5rA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.5058e+003.63e-14 1d5rA b.7.1.1
c.45.1.1
1knyA/T0386-1knyA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1knyA/T0386-1knyA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.7140e+001.14e-11 1knyA a.24.16.1
d.218.1.1
1g8lA/T0386-1g8lA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1g8lA/T0386-1g8lA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.0392e+002.14e-07 1g8lA b.85.6.1
b.103.1.1
c.57.1.2
1z2nX/T0386-1z2nX-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1z2nX/T0386-1z2nX-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.1901e+001.10e-08
2b3oA/T0386-2b3oA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2b3oA/T0386-2b3oA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.0636e+002.25e-12
1uqtA/T0386-1uqtA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1uqtA/T0386-1uqtA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.8055e+004.38e-14 c.87.1.6

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001