CreatePredAlphaCost pred_alpha2k alpha11 T0385.t2k.alpha.rdb 2 alpha alpha_prev sum CreatePredAlphaCost pred_alpha04 alpha11 T0385.t04.alpha.rdb 2 alpha alpha_prev sum CreatePredAlphaCost pred_alpha06 alpha11 T0385.t06.alpha.rdb 2 alpha alpha_prev sum SetCost wet6.5 15 near_backbone 5 way_back 5 dry5 20 dry6.5 30 dry8 15 dry12 5 \ phobic_fit 0.3 \ sidechain 5 \ n_ca_c 5 bad_peptide 10 \ bystroff 5 \ soft_clashes 20 backbone_clashes 2 \ break 50 \ pred_alpha2k 2 \ pred_alpha04 2 \ pred_alpha06 2 \ constraints 10 \ hbond_geom 5 \ hbond_geom_backbone 10 \ hbond_geom_beta 50 \ hbond_geom_beta_pair 100 \ missing_atoms 1 # from T0385.dssp-ehl2.constraints HelixConstraint S20 S44 0.7607 HelixConstraint P49 A75 0.6746 HelixConstraint A96 H120 0.6603 HelixConstraint A124 R146 0.6775 # from alignment to 2fkzA Constraint W114.CB A130.CB -10 5.6 7 0.3 Constraint W114.CB L134.CB -10 4.7 6.5 0.3 Constraint V118.CB A130.CB -10 5.0 6.5 0.3 Constraint W114.CB A133.CB -10 6.1 7.5 0.3 Constraint W144.CB V104.CB -10 4.3 6.5 0.3 Constraint V104.CB L148.CB -10 7.1 8 0.3 Constraint V117.CB A25.CB -10 4.3 5.5 0.3 Constraint V117.CB A29.CB -10 5.9 7 0.3 Constraint A29.CB A133.CB -10 7.6 9 0.3 Constraint M106.CB A35.CB -10 6.9 8 0.3 Constraint I42.CB A99.CB -10 7.1 8 0.3 Constraint I42.CB A96.CB -10 9.2 10 0.3 Constraint L73.CB L26.CB -10 5.0 6.5 0.3 Constraint V69.CB L26.CB -10 5.5 6.5 0.3 Constraint V69.CB L30.CB -10 4.4 5.5 0.3 Constraint V55.CB V43.CB -10 5.9 7 0.3 Constraint V43.CB V51.CB -10 4.0 5 0.3 Constraint F129.CB M72.CB -10 5.8 7 0.3 Constraint F239.CB V69.CB -10 7.6 9 0.3 Constraint M140.CB A58.CB -10 5.9 7 0.3