CreatePredAlphaCost pred_alpha2k alpha11 T0385.t2k.alpha.rdb 2 alpha alpha_prev sum
CreatePredAlphaCost pred_alpha04 alpha11 T0385.t04.alpha.rdb 2 alpha alpha_prev sum
CreatePredAlphaCost pred_alpha06 alpha11 T0385.t06.alpha.rdb 2 alpha alpha_prev sum

SetCost wet6.5 15 near_backbone 5 way_back 5 dry5 20 dry6.5 35 dry8 20 dry12 5 \
	phobic_fit 0.3 \
	sidechain 5 \
	n_ca_c	5 bad_peptide 10 \
	bystroff 5 \
	soft_clashes 20  backbone_clashes 2 \
	break 80  \
	pred_alpha2k 2 \
	pred_alpha04 2 \
	pred_alpha06 2 \
	constraints 15 \
	hbond_geom 5 \
	hbond_geom_backbone 10 \
	hbond_geom_beta 50 \
	hbond_geom_beta_pair 100 \
	missing_atoms 1 

# added to trying to "unhelix" the linker that is a bit too short
StrandConstraint	A84	P90	0.1
StrandConstraint	A121	T123	5

# from T0385.dssp-ehl2.constraints
HelixConstraint 	S20	S44	0.7607
HelixConstraint 	P49	M72	1
HelixConstraint 	A96	H120	2
HelixConstraint 	A124	R146	8

# to produce the capping motif from 73-74
hbond V78.N L73.O 1
hbond G77.N S74.O 1