Best Alignments for T0385

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1vjxA/T0385-1vjxA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vjxA/T0385-1vjxA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.0158e-031.91e-24 a.25.1.1
2fkzA/T0385-2fkzA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fkzA/T0385-2fkzA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4112e-028.92e-20
1tjoA/T0385-1tjoA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1tjoA/T0385-1tjoA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.6343e-019.29e-17
1z6oM/T0385-1z6oM-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1z6oM/T0385-1z6oM-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.0981e-013.95e-16
1za0A/T0385-1za0A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1za0A/T0385-1za0A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.9908e-016.82e-14
2gyqA/T0385-2gyqA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2gyqA/T0385-2gyqA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.0130e-014.99e-14
1b5pA/T0385-1b5pA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1b5pA/T0385-1b5pA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1550e+009.22e-12 c.67.1.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001