Best Alignments for T0385

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1bcfA/T0385-1bcfA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1bcfA/ 5.9504e-041.85e-20 1bcfA a.25.1.1
2fkzA/T0385-2fkzA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fkzA/ 1.2904e-038.92e-20
1tjoA/T0385-1tjoA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1tjoA/ 6.5571e-023.13e-16
2gyqA/T0385-2gyqA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2gyqA/ 1.6299e-011.35e-13
1za0A/T0385-1za0A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1za0A/ 5.8713e-011.95e-09
1sofA/T0385-1sofA-t04-global-adpstyle1.a2m 1sofA/ 5.9241e-011.53e-04
1bjwA/T0385-1bjwA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1bjwA/ 7.3921e-015.08e-13 1bjwA c.67.1.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001