(c) 1992-2000 Regents of the University of California, Santa Cruz
Sequence Alignment and Modeling Software System
http://www.soe.ucsc.edu/research/compbio/sam.html

Citations (SAM, SAM-T99, HMMs)

Sequence numbers correspond to the following labels:

    • T0385 Rv2844, Mycobacterium tuberculosis, 162 res
    • gi|13882684|gb|AAK47236.1|_1:162 hypothetical protein MT2910 [Mycobacterium tuberculosis CDC1551]
    • gi|31794021|ref|NP_856514.1| CONSERVED HYPOTHETICAL ALANINE RICH PROTEIN [Mycobacterium bovis AF2122/97]
    • gi|31619615|emb|CAD95054.1| CONSERVED HYPOTHETICAL ALANINE RICH PROTEIN [Mycobacterium bovis AF2122/97]
    • gi|2078015|emb|CAB08446.1| CONSERVED HYPOTHETICAL ALANINE RICH PROTEIN [Mycobacterium tuberculosis H37Rv]
    • gi|15609981|ref|NP_217360.1| CONSERVED HYPOTHETICAL ALANINE RICH PROTEIN [Mycobacterium tuberculosis H37Rv]
    • gi|15842385|ref|NP_337422.1| hypothetical protein MT2910 [Mycobacterium tuberculosis CDC1551]
    • gi|76783319|ref|ZP_00770511.1| hypothetical protein MtubF_01002930 [Mycobacterium tuberculosis F11]
    • gi|81253091|ref|ZP_00877654.1| hypothetical protein MtubC_01002712 [Mycobacterium tuberculosis C]
    • gi|17429380|emb|CAD16067.1|_40:203 putative ferritin/ribonucleotide reductase-like; protein [Ralstonia solanacearum]
    • gi|17547079|ref|NP_520481.1| hypothetical protein RSc2360 [Ralstonia solanacearum GMI1000]
    • gi|83746732|ref|ZP_00943781.1|_42:205 Hypothetical Protein RRSL_03646 [Ralstonia solanacearum UW551]
    • gi|83726685|gb|EAP73814.1| Hypothetical Protein RRSL_03646 [Ralstonia solanacearum UW551]
    • gi|94310591|ref|YP_583801.1|_43:206 hypothetical protein Rmet_1649 [Ralstonia metallidurans CH34]
    • gi|93354443|gb|ABF08532.1| conserved hypothetical protein [Ralstonia metallidurans CH34]
    • gi|71847371|gb|AAZ46867.1|_31:192 conserved hypothetical protein [Dechloromonas aromatica RCB]
    • gi|71907750|ref|YP_285337.1| hypothetical protein Daro_2125 [Dechloromonas aromatica RCB]
    • gi|72117817|gb|AAZ60080.1|_41:204 conserved hypothetical protein [Ralstonia eutropha JMP134]
    • gi|73540404|ref|YP_294924.1| hypothetical protein Reut_A0698 [Ralstonia eutropha JMP134]
    • gi|33568423|emb|CAE32335.1|_28:189 putative exported protein [Bordetella bronchiseptica RB50]
    • gi|33600823|ref|NP_888383.1| hypothetical protein BB1838 [Bordetella bronchiseptica RB50]
    • gi|33566432|emb|CAE37685.1|_28:189 putative exported protein [Bordetella parapertussis]
    • gi|33596981|ref|NP_884624.1| hypothetical protein BPP2388 [Bordetella parapertussis 12822]
    • gi|33563409|emb|CAE42288.1|_28:189 putative exported protein [Bordetella pertussis Tohama I]
    • gi|33593034|ref|NP_880678.1| hypothetical protein BP2008 [Bordetella pertussis Tohama I]
    • gi|56314941|emb|CAI09586.1|_31:192 conserved hypothetical protein,putatively exported via twin-arginine system [Azoarcus sp. EbN1]
    • gi|56478898|ref|YP_160487.1| conserved hypothetical protein, putatively exported via twin-arginine system [Azoarcus sp. EbN1]
    • gi|41409010|ref|NP_961846.1|_1:148 hypothetical protein MAP2912 [Mycobacterium avium subsp. paratuberculosis K-10]
    • gi|41397369|gb|AAS05229.1| hypothetical protein MAP_2912 [Mycobacterium avium subsp. paratuberculosis K-10]
    • gi|91789245|ref|YP_550197.1|_29:190 hypothetical protein Bpro_3389 [Polaromonas sp. JS666]
    • gi|91698470|gb|ABE45299.1| conserved hypothetical protein [Polaromonas sp. JS666]
    • gi|13093374|emb|CAC30512.1|_1:165 conserved hypothetical protein [Mycobacterium leprae]
    • gi|4455673|emb|CAB36565.1| hypothetical protein MLCB596.09c [Mycobacterium leprae]
    • gi|15827822|ref|NP_302085.1| hypothetical protein ML1561 [Mycobacterium leprae TN]
    • gi|89902893|ref|YP_525364.1|_29:190 hypothetical protein Rfer_4137 [Rhodoferax ferrireducens T118]
    • gi|89347630|gb|ABD71833.1| conserved hypothetical protein [Rhodoferax ferrireducens DSM 15236]
    • gi|89341890|ref|ZP_01194131.1|_1:161 conserved hypothetical alanine rich protein [Mycobacterium flavescens PYR-GCK]
    • gi|89317928|gb|EAS09426.1| conserved hypothetical alanine rich protein [Mycobacterium flavescens PYR-GCK]
    • gi|90205349|ref|ZP_01207989.1|_172:334 hypothetical protein MvanDRAFT_1273 [Mycobacterium vanbaalenii PYR-1]
    • gi|90195673|gb|EAS22438.1| hypothetical protein MvanDRAFT_1273 [Mycobacterium vanbaalenii PYR-1]
    • gi|108804501|ref|YP_644438.1|_30:195 Twin-arginine translocation pathway signal [Rubrobacter xylanophilus DSM 9941]
    • gi|108765744|gb|ABG04626.1| Twin-arginine translocation pathway signal [Rubrobacter xylanophilus DSM 9941]
    • gi|108804502|ref|YP_644439.1|_43:203 Twin-arginine translocation pathway signal [Rubrobacter xylanophilus DSM 9941]
    • gi|108765745|gb|ABG04627.1| Twin-arginine translocation pathway signal [Rubrobacter xylanophilus DSM 9941]
    • gi|108799044|ref|YP_639241.1|_1:156 conserved hypothetical alanine rich protein [Mycobacterium sp. MCS]
    • gi|108769463|gb|ABG08185.1| conserved hypothetical alanine rich protein [Mycobacterium sp. MCS]
    • gi|92915719|ref|ZP_01284341.1| conserved hypothetical alanine rich protein [Mycobacterium sp. KMS]
    • gi|92907210|ref|ZP_01275990.1| conserved hypothetical alanine rich protein [Mycobacterium sp. JLS]
    • gi|92439917|gb|EAS97762.1| conserved hypothetical alanine rich protein [Mycobacterium sp. KMS]
    • gi|92435510|gb|EAS94841.1| conserved hypothetical alanine rich protein [Mycobacterium sp. JLS]
    • gi|46121187|ref|XP_385148.1|_11:177 hypothetical protein FG04972.1 [Gibberella zeae PH-1]
    • gi|42551996|gb|EAA74839.1| hypothetical protein FG04972.1 [Gibberella zeae PH-1]
    • gi|85103631|ref|XP_961562.1|_35:204 hypothetical protein [Neurospora crassa OR74A]
    • gi|18376313|emb|CAD21425.1| related to stress response protein rds1p [Neurospora crassa]
    • gi|28923109|gb|EAA32326.1| predicted protein [Neurospora crassa]
    • gi|86609345|ref|YP_478107.1|_36:209 Tat (twin-arginine translocation) pathway signal sequence domain protein [Synechococcus sp. JA-2-3B'a(2-13)]
    • gi|86557887|gb|ABD02844.1| Tat (twin-arginine translocation) pathway signal sequence domain protein [Synechococcus sp. JA-2-3B'a(2-13)]
    • gi|35210741|dbj|BAC88122.1|_17:191 gll0181 [Gloeobacter violaceus PCC 7421]
    • gi|37519750|ref|NP_923127.1| hypothetical protein gll0181 [Gloeobacter violaceus PCC 7421]
    • gi|35215003|dbj|BAC92369.1|_4:168 glr4428 [Gloeobacter violaceus PCC 7421]
    • gi|37523997|ref|NP_927374.1| hypothetical protein glr4428 [Gloeobacter violaceus PCC 7421]
    • gi|71022959|ref|XP_761709.1|_12:180 hypothetical protein UM05562.1 [Ustilago maydis 521]
    • gi|46101095|gb|EAK86328.1| hypothetical protein UM05562.1 [Ustilago maydis 521]
    • gi|88178991|gb|EAQ86459.1|_52:203 hypothetical protein CHGG_07712 [Chaetomium globosum CBS 148.51]
    • gi|90306036|gb|EAS35667.1|_23:178 hypothetical protein CIMG_01021 [Coccidioides immitis RS]
    • gi|50417629|ref|XP_457712.1|_6:179 hypothetical protein DEHA0C00814g [Debaryomyces hansenii CBS767]
    • gi|49653378|emb|CAG85738.1| unnamed protein product [Debaryomyces hansenii CBS767]
    • gi|55773569|dbj|BAD72009.1|_18:181 conserved hypothetical protein [Thermus thermophilus HB8]
    • gi|55978396|ref|YP_145452.1| hypothetical protein TTHB213 [Thermus thermophilus HB8]
    • gi|46255240|ref|YP_006152.1|_18:181 hypothetical protein TT_P0169 [Thermus thermophilus HB27]
    • gi|46198089|gb|AAS82499.1| hypothetical conserved protein [Thermus thermophilus HB27]
    • gi|29829098|ref|NP_823732.1|_1:153 hypothetical protein SAV2556 [Streptomyces avermitilis MA-4680]
    • gi|29606204|dbj|BAC70267.1| hypothetical protein [Streptomyces avermitilis MA-4680]
    • gi|21224050|ref|NP_629829.1|_1:141 hypothetical protein SCO5701 [Streptomyces coelicolor A3(2)]
    • gi|7801273|emb|CAB91137.1| hypothetical protein SC5H4.25c [Streptomyces coelicolor A3(2)]
    • gi|86143184|ref|ZP_01061586.1|_38:214 hypothetical protein MED217_08380 [Flavobacterium sp. MED217]
    • gi|85830089|gb|EAQ48549.1| hypothetical protein MED217_08380 [Flavobacterium sp. MED217]
    • gi|71914909|gb|AAZ54811.1|_1:151 conserved hypothetical protein [Thermobifida fusca YX]
    • gi|72161177|ref|YP_288834.1| hypothetical protein Tfu_0773 [Thermobifida fusca YX]
    • gi|54017550|dbj|BAD58920.1|_2:141 hypothetical protein [Nocardia farcinica IFM 10152]
    • gi|54026042|ref|YP_120284.1| hypothetical protein nfa40710 [Nocardia farcinica IFM 10152]
    • gi|88941036|ref|ZP_01146463.1|_16:175 bacterioferritin [Acidiphilium cryptum JF-5]
    • gi|88920205|gb|EAR39329.1| bacterioferritin [Acidiphilium cryptum JF-5]
    • gi|71368363|ref|ZP_00658864.1|_2:139 Conserved hypothetical protein [Nocardioides sp. JS614]
    • gi|71155931|gb|EAO06357.1| Conserved hypothetical protein [Nocardioides sp. JS614]
    • gi|90418640|ref|ZP_01226551.1|_6:144 hypothetical protein SI859A1_00544 [Aurantimonas sp. SI85-9A1]
    • gi|90336720|gb|EAS50425.1| hypothetical protein SI859A1_00544 [Aurantimonas sp. SI85-9A1]
    • gi|86742248|ref|YP_482648.1|_1:173 hypothetical protein Francci3_3567 [Frankia sp. CcI3]
    • gi|86569110|gb|ABD12919.1| conserved hypothetical protein [Frankia sp. CcI3]
                            10                 20             30       
                            |                  |              |       
   1 ...M..T...SSEP..AH.G...ATPK.R....SP..S.EG.S.A...DNAALC.DALAVEHA..
   2 ...M..T...SSEP..AH.G...ATPK.R....SP..S.EG.S.A...DNAALC.DALAVEHA..
   3 s..LaaV...SLGR..SM.P...AWAQ.T....QS..G.SV.K.D...DINILN.TALGLEYQ..
   4 s..LaaV...SLGQ..SM.P...AWAQ.A....QS..G.SV.K.D...DINILN.VALGLEYQ..
   5 slaV..M...SLGE..AM.P...AWGQ.T....HS..T.ST.K.D...DINILN.TALGLEYQ..
   6 s..GaaV...ALLT..GQ.D...ALAA.K....SA..D.GV.E.S...DLRILN.TALGAELE..
   7 slaV..L...SLGE..SM.P...AWAQ.T....HS..G.ST.K.D...DINILN.VALGLEYQ..
   8 saaA..V...ALLA..GK.D...ALAA.Q....AG..S.GS.S.Q...DVQILN.TALAAELE..
   9 saaA..V...ALLA..GK.D...ARAA.Q....AG..S.GS.S.Q...DVQILN.TALAAELE..
  10 saaA..V...ALLA..GK.D...ALAA.Q....AG..S.GS.S.Q...DVQILN.TALAAELE..
  11 ...A..V...ALLA..GR.P...ALAA.Q....AD..T.RQ.G.DpaaDARILN.TALAAEHE..
  12 ...-..-...----..--.-...----.-....MT..S.GK.D.A...DNAALC.DALAIEHS..
  13 s..GaaI...ALLA..GN.D...ALAA.K....AG..G.SK.A.G...DVQILN.TAIGAELE..
  14 ...M..T...SIEP..SA.PtpvATPK.R....TP..V.SQ.D.S...DNAGLS.EALVVEHS..
  15 s..GaaV...ALLA..GN.D...ALAA.K....AG..G.GK.A.A...DIQILN.TAIGAELE..
  16 ...M..T...SPTP..AP.Tda.ALPT.R....--..-.PE.D.A...AAGALF.DALAAEHA..
  17 ghaG..R...CGRF..TM.T...APDQ.G....MP..SrPD.D.A...ADGALF.DAIATEHA..
  18 ...L..AlagAGAA..AG.T...AVLA.A....PA..S.AQ.S.G...DVDIAN.FALTLEYLea
  19 ggfG..V...AVRY..AH.G...QEQQ.A....YT..T.YQ.DlT...DAQILQ.FAYLLELLeg
  20 ...M..T...SVEP..TP.P...ARPA.-....--..-.-D.S.A...D-GALY.DAIATEHA..
  21 t..LaaA...SLVA..AA.P...AIQK.R....A-..-.DA.I.N...DGVILN.YALTLEHL..
  22 qlkI..H...SFMR..RQ.N...ALAT.A....AG..L.--.-.T...DVDILQ.FALTLEHLen
  23 ...L..L...AGVG..GA.I...GLRT.L....PGaaQ.SN.T.A...DIAILN.AAIDLEQQ..
  24 ...L..LagaAGTL..SL.M...AGTR.L....AF..G.QD.K.G...DLAILQ.AAHDLESQ..
  25 ...-..-...----..-M.A...TFDA.I....LA..T.DK.Q.N...DLEILN.NALYFEHQ..
  26 a..A..Taa.AAVA..AA.P...AQKR.A....AA..G.QA.D.I...DVVILN.YALTLEHLen
  27 ...-..-...----..--.-...----.-....--..-.LG.L.N...DVDILQ.FALTLEWLea
  28 avpL..E...ARNT..TS.I...APNT.N....RS..T.TR.V.T...DVDVLQ.FALTLEHL..
  29 ltfL..L...SGLMaaST.I...AAPA.N....IA..K.RD.D.I...DVDILQ.YALTLEHLen
  30 tatG..L...SAAF..AG.S...LLDRaL....AA..H.GG.P.S...DADILQ.LALTAEYL..
  31 tatG..L...SAAF..AG.S...LLDRaL....AA..H.GG.P.S...DADILQ.LALTAEYL..
  32 ...-..M...SAST..GT.T...GTPK.-....AE..S.TE.S.A...ELRALQ.AALGAEHA..
  33 ...-..-...----..--.-...----.-....MG..K.AG.N.G...RLDALQ.AALAAEHA..
  34 kaaL..A...AVPF..GLaT...ASNK.A....MA..Q.ST.G.D...VVGVLN.LALTLEYLed
  35 ...-..-...----..-M.T...GTLD.P....TP..S.GEaG.A...ATAALR.DALLAEHA..
  36 ...-..-...----..--.-...----.-....--..-.MT.D.A...ERQALL.DALRAEYA..
  37 lrdV..R...AISA..RMhG...ALLD.E....ES..E.GA.D.P...ALVLLQ.SALTAEIL..
  38 ...-..-...----..--.-...----.-....--..-.--.M.A...ELDALQ.IALAAEHA..
  39 ...-..-...----..--.-...----.-....TT..V.GT.E.T...DIKSLVrDLIILEHD..
  40 ...M..T...ADTP..SG.DpasATPT.EstaaTE..H.PD.P.A...GVAALV.TMLTATHA..


             40                         50                     60      
             |                          |                      |      
   1 T..IY..GY.....G.I....VS..A.LSP....PG....VNFL.V....AD....ALK....Q.
   2 T..IY..GY.....G.I....VS..A.LSP....PG....VNFL.V....AD....ALK....Q.
   3 A..IA..AYqv...G.A....ES..G.LLQ....KP....VLAT.A....VK....FQG....H.
   4 A..IA..AYqv...G.A....ES..G.LLQ....KP....VLDT.A....VK....FQG....H.
   5 A..IA..AYqv...G.A....ES..G.LLQ....KP....VLDT.A....VK....FQT....H.
   6 A..IA..AYql...G.A....ES..G.LLQ....KP....VLDL.A....MT....FQG....H.
   7 A..IA..AYqv...G.A....ES..G.LLQ....KP....VLDT.A....VK....FQN....H.
   8 A..IA..AYql...G.A....ES..K.LLD....KP....VLAL.A....LT....FQG....H.
   9 A..IA..AYql...G.A....ES..K.LLD....KP....VLAL.A....LT....FQG....H.
  10 A..IA..AYql...D.A....ES..K.LLD....KP....VLAL.A....LT....FQG....H.
  11 A..IA..AYql...G.A....GS..G.LLR....AP....MRDL.A....LQ....FQG....H.
  12 T..IY..GY.....G.I....VS..A.MSP....PS....VNDM.V....VE....ALE....Q.
  13 A..IA..AYql...G.A....ES..K.LLT....KP....VLDL.A....VT....FQG....H.
  14 T..IY..GY.....G.I....VL..A.LSP....PN....ANSL.V....VD....ALI....Q.
  15 A..IA..AYql...G.A....ES..K.LLS....KP....VLDL.A....LT....FQG....H.
  16 T..IY..GY.....G.V....VS..A.HST....PE....LNYL.V....SA....AIA....E.
  17 T..IY..GY.....G.L....VS..A.HST....PD....VNYL.V....SE....AMA....E.
  18 E..FY..AR.....A.V....DS..G.VLS....GD....VVGI.V....QN....LAD....H.
  19 T..FY..DQ.....G.V....QS..G.LFS....GN....ELSQ.I....TA....IRD....H.
  20 A..IY..GY.....G.L....VS..A.HST....PE....VNWL.V....SA....SIA....E.
  21 EnqFY..LQ.....G.L....-S..N.FTE....KD....FADA.G....YDst..FYG....N.
  22 T..FY..REgf8aaD.F....TAl.G.LSE....SQ....IKDL.-....-Q....GIG....Si
  23 A..IW..AY.....K.T....AA..GkLSN....TE....VGKI.V....LEvatkNLK....D.
  24 A..IW..AY.....G.A....AA..GkLSK....TD....VGKT.V....LElalrNQA....D.
  25 G..IW..AY.....D.F....AA..GkLSN....TDvgkaVLAL.A....LE....NQA....D.
  26 A..FY..RD.....S.Laty.DA..GaFRA....AG....YPEW.VrqrfVE....IGG....H.
  27 T..FY..QQgf8atD.F....QAl.G.LEQ....RE....IDAL.I....-K....IGK....T.
  28 EsvFY..RQ.....G.LsrftRA..D.FIR....AG....FPAS.Ffnq.LQ....FVA....R.
  29 A..FYkkAL.....S.T....WSvdD.FTK....AN....FSSD.F....YS....QLKyiahD.
  30 A..VD..AYtk...S.L....FG..G.F-Q....GL....VKDY.L....EA....ALT....Q.
  31 A..AD..AYtr...S.L....FG..G.F-Q....GL....VKDY.L....EV....ALS....Q.
  32 A..VY..GY.....G.V....VG..G.KIG....QA....RRAD.A....RA....AYD....A.
  33 A..VY..GY.....G.V....VG..G.RIA....ED....RRAE.A....RT....AYD....A.
  34 E..FY..AM.....A.L....DS..G.VLS....NN....AKAEaI....YM....QIS....K.
  35 A..VY..GY.....S.F....AA..A.HTD....AD....LRSL.C....LS....HLE....K.
  36 A..VY..AY.....G.V....IA..A.YAS....PE....RAGL.I....AE....HTA....A.
  37 C..VW..RYtmm..S.Vs...LA..G.LKQ....PR....IGAE.F....QE....QAN....D.
  38 A..VY..VY.....G.A....LG..G.RTSrsatPE....LFAS.V....VR....AYD....A.
  39 A..IA..AY.....EtC....IE..N.LSD....KS....LATQ.V....AA....FRK....D.
  40 A..VY..ATaaag.G.A....VAplG.PAA....AQ....AREL.A....RL....SCL....A.


                   70        80                 90               100   
                   |         |                  |                 |   
   1 HR.....H.RRDDVIVMLSARGVTAP..IAA..AGYQL.....PM.....Q.V..SSAADAARLA
   2 HR.....H.RRDDVIVMLSARGVTAP..IAA..AGYQL.....PM.....Q.V..SSAADAARLA
   3 HK.....A.HAQVLSGTVSKLGGTPV..MEKkvAEYNF.....PVs....Q.L..KTQADVLRFA
   4 HK.....A.HAQVLAGTVSKMGGTPV..MAKktAEYNF.....PVs....Q.L..KTQADVLRFA
   5 HK.....A.HADVLANTVMKLGGTPVktRKA..SEYNF.....PAa....D.L..KTQADVLRFA
   6 HK.....E.HADLLGSTIMKLGGKPV..TAR..SKYSF.....PL.....EtL..KTQVDVLRFA
   7 HK.....A.HAQVLAGTVSKLGGSPV..MAKkpSEYSF.....PTg....Q.L..KTQADVLRFA
   8 HK.....E.HADVLGKTVEKLGGRPV..AAK..RNYAF.....PTs....Q.L..KSQADVLRFA
   9 HK.....E.HADVLGKTVEKLGGQPV..AAK..RNYAF.....PTs....Q.L..KSQADVLRFA
  10 HK.....E.HADVLGKTVEKLGGQPV..AAK..RSYAF.....PTs....Q.L..KSQADVLRFA
  11 HK.....A.HVDLLAQTVTKLGGKPA..ESR..QKYDF.....PVa....T.L..KAEADVLRFA
  12 HR.....Q.RRDDVIAMLTARKVTAP..VAA..AGYQL.....PL.....V.V..GSPADAARLA
  13 HK.....A.HVALLSGTVEKLGGKPV..IAK..TKYNF.....PVd....Q.L..KTELDVLKFA
  14 HR.....Q.RRDDIIVMLTARRVSPP..VAA..SGYQL.....PM.....L.V..GSAADAARLA
  15 HK.....E.HVALLSGTVAKLGGKAA..VAK..AKYNF.....PVd....Q.L..KAELDVLKFA
  16 HR.....A.RREAAIALCEQQGVDPA..VPE..AGYQM.....PF.....E.V..DTPADATNLA
  17 HR.....A.RREAAIALLAEQGAEAP..LPA..AGYQL.....PM.....E.V..DTPAEAVDLA
  18 EQ.....Q.HVDAIVGLLQQAGAEPV..-EK..PQFTF.....PA.....DaF..SSQDSILNLA
  19 EM.....A.HADAIAGVLGQLGAEVP..-AA..PNFTY.....PQ.....NaF..GDRNAFLELA
  20 HR.....E.RREAAIALLEQRQVAAP..LPA..AGYQV.....PM.....R.V..DDPRDAAKLA
  21 IKkv7esA.HVDFLTKGLKAAGVTPV..-EK..CSYSF.....--.....G.V..TDVKSFLATA
  22 EE.....E.HVILLQGAIAGAGAKPV..-QE..CKYNF.....-Q.....N.V..TSAAAMVATA
  23 HE.....Q.HRDLLAGAVRQLGGIPS..RAR..DSYDL.....STyi7egN.L..DSDANIAKLA
  24 HK.....S.HRAALADAIKSLGATPA..PAK..DSYDL.....SAyl7egG.L..DSDANIAKLA
  25 HK.....Q.HRAVLSAAIRDLGGTPV..QPE..PSYDL.....SSyl7egN.L..DSDVNIAKLA
  26 EK.....A.HVDFLTKAL----GDQA..TKE..CTYNF.....--.....G.V..TDVNTFIATA
  27 EE.....E.HVILLQSAIAQAGVQPV..QP-..CTYNF.....--.....G.F..TDAAGMVATA
  28 DE.....AsHVVFLQRALTGLGVRPV..-SA..CRYNF.....PF.....-.-..TDVRSFVGLA
  29 EE.....A.HVQYLEAGLKAVGAKPV..-ET..CTYTF.....PM.....Q.-..-SAEDFVALA
  30 EE.....A.HVKALRDTLSALGVKPV..-EK..PSFVY.....PV.....E.FlpRNQLAILRLL
  31 EE.....A.HVKALRDTLSALGVKPV..-EK..PSFVY.....PV.....E.FlpRNQLAILRLL
  32 HR.....A.RRDELARSVRDLGGTPQ..AAA..AGYAL.....PF.....A.V..PDATAAVRLA
  33 HR.....A.RRDALAREVRDLGGEPV..AAA..AGYAL.....PF.....S.V..PDSAAAVRLA
  34 HEs....Q.HVDFLTAAIEGAGADPV..-AK..PSFDFtv7fdPFne6agQ.A..TAYAQLLALA
  35 HR.....A.WRDTLHSALVARDAVPP..GGE..DAYQL.....P-.....E.H..TGPEELRSFA
  36 HR.....A.RRDATADALRAAGADVP..SPD..AAYGV.....PF.....P.V..QDPVAAARLA
  37 ER.....R.HMVAIAQRIRELGGTPD..FSP..HGLET.....RFg....E.F..GTRADLAGLV
  38 HR.....A.RRDRLTATILDEGAEPV..AAE..PAYEL.....P-.....R.L..DTPAQVDRAA
  39 HQ.....Q.HLDVLHEMARELSFDPP..TSG..DMKQV.....LTtg7laG.L..MGDATILKAM
  40 HQ.....A.LRDDLITAIRARGGDAP..PAL..PAYRL.....PV.....A.P..EGIGAALALL


             110        120         130        140             150     
              |          |           |          |               |     
   1 VRM...ENDGATAWRA.VVEHAE.TAD.DRVFAST.ALTESAVMATRWN...RVL..G.A.W.PI
   2 VRM...ENDGATAWRA.VVEHAE.TAD.DRVFAST.ALTESAVMATRWN...RVL..G.A.W.PI
   3 AGL...EKGATSAYLG.VLPNFY.TRD.LTKAAAS.ILGDEAMHWAILL...SVL..G.E.D.PV
   4 AGL...EKGATSAYLG.VIPNFY.TRD.LTKAAAS.ILGDEAMHWAILL...SVL..G.E.D.PV
   5 AGL...EKGATAAYLG.VLPSFH.NRE.LAKSAGS.ILGDEAMHWAILL...SVL..G.E.D.PV
   6 AGL...EKGAVSAYLG.AIPVFG.NRD.LAKAAGS.ILGDEAMHWAILR...NAV..G.D.V.PV
   7 AGL...EKGATAAYLG.VLPNFY.NRD.LTKAAGS.ILGDEAMHWAVLL...HAL..G.D.D.PV
   8 AKL...EQGAVSAYLG.AVPLFA.NRD.LSKAAAS.ILGDEAMHWAVLR...QAL..G.E.P.PV
   9 AKL...EQGAVSAYLG.AVPLFA.NRD.LSKAAAS.ILGDEAIHWAVLR...QAL..G.E.P.PV
  10 AKL...EQGAVSAYLG.AVPLFA.NRD.LSKAAAS.ILGDEAMHWAVLR...QAL..G.E.P.PV
  11 SGL...EQGAVSAYLG.AVPLFA.NPD.LAKAAAS.ILGDEAMHWAILR...QAL..G.E.D.PV
  12 ARM...ENDGAGAWRV.VAEHAE.TGD.DRAFAAT.ALVQSAVMAARWN...RVL..G.A.W.PI
  13 AQL...EQGAVSAYLG.AVPLFA.NRD.LSKAAAS.ILGDEAMHWAILR...QAI..G.E.A.PV
  14 VRM...ENDGATAWRA.VAEHAE.TAD.DRTFAAM.ALAQSAVMAARWN...KML..G.A.W.PI
  15 ASL...EQGAVSAYLG.AVPLFG.NHD.LAKAAAS.ILGDEAMHWAILR...QAI..G.E.V.PV
  16 VQM...EEDAAEAWRA.VVEQAT.DPG.VRAFGVT.ALTECAVTAAQWR...AVR..G.D.T.TV
  17 VRM...EEDAAVAWRA.VVEQAA.DQA.VRAFGVT.ALTECALTAARWR...AVR..G.D.S.TV
  18 NTF...EPVGVGAYLG.AAPLIQ.SPD.ILAAAGS.IAGVEGEHVVTIR...NVL..G.L.L.PA
  19 NTF...EPVGIGAYQG.AAPALD.SKD.ILASAIS.IHNSECQHWNAIK...ILR..GvQ.P.PN
  20 VRM...EEDGAAAWRA.VVEQAT.GTE.DRTFGLT.ALTESAVAAARWT...QIA..G.T.D.PV
  21 SVL...EGVGVSAYLG.AAADIM.SKT.YLTAAGS.ILTVEARHSSYIR...AGL..K.Q.V.PF
  22 AVL...ENVGVSAYLG.AAQLVT.DPG.ILTTAGS.ILTVEARHQTFIR...AAS..G.V.V.AV
  23 LAL...EFDAALAYND.AFVQLS.NKD.LVAAAST.IGPNEVAHATAIR...AVF..H.S.LdPS
  24 LAL...EIDAALAYQS.AFGKLK.TPA.LQAAASS.ILPAEAGHATAIR...AVF..H.GlM.PT
  25 LAV...ETDAAIAYVT.EAAKLK.IPS.LVMAAAG.IGSVESIHAARIR...AAF..N.S.L.GI
  26 ALL...EGIGESAYLG.AAQNIT.NPG.TLTAAGS.ILTVESRHSGWVSs..SVLkgD.G.F.PR
  27 AVL...ENVGVSAYLG.AASLIS.DTS.ILTTAGS.ILTIEARHQTFVR...AAS..R.G.I.PV
  28 SVL...EGIGVSAYLG.GAPLIS.NKG.FLGAAGA.ILAAEGVHQSLFR...NSL..N.L.I.A-
  29 ATI...EGVGVSAYLG.ASPMVT.SKQ.YLTAAAS.ILATEALHQSAAR...NAV..G.E.V.PM
  30 NAL...EDAFVGAYLG.ALPLIQ.SKD.VLKAAGA.ILGNEAAHRATVRasrILL..G.D.-.--
  31 NAL...EDAFVGAYLG.ALPLIQ.SKD.VLKAAGA.ILGNEAAHRATVRasrILL..G.D.-.--
  32 AEL...EERVAGVYSD.LVR-AG.TGA.RRRSAAE.ALREAAVRAVRWS...---..G.E.-.--
  33 AEL...EDRLAGVYSD.LVRAAE.GGG.-RTSAAG.ALREAAVRAVRWR...---..G.G.-.--
  34 QAF...EDTGVRAYKGqAANLMG.SAG.VLTAALQ.IHSVEARHASEIR...RLR..G.-.-.-L
  35 AGL...EETTAQAYLE.LAAVPD.-AG.LRDLAGR.ALGEATLRMLALG...GQL..S.A.F.P-
  36 ETV...ETDATVAWRA.VVEQGD.SEA.TRRLGVE.ALTEAALRLAAWQ...AIL..G.-.T.PS
  37 EQNlaaEREVIGLYRR.MIDHFE.PHDpVTALMLTnILEEESEHATDMQ...DLL..SiE.T.--
  38 LAV...ERACAATYAY.LVEH-T.VGE.QRRSAVG.ALNEAAVR----E...LVF..R.G.T.P-
  39 KTN...EDDTVAAYRR.AADHGDaVPK.SKAFFAS.ALADEERHRAWMD...STA..A.-.-.--
  40 ARI...EDACAMAAHD.AVAVL-.VGD.VRALALD.ALTGTAVRAQRAR...IAA..G.-.M.PL


                      160          
                       |          
   1 ...T.AAF..P...G...G.D...E....
   2 ...T.AAF..P...G...G.D...E....
   3 ...P.VAF..V...G...-.-...-....
   4 ...P.VAF..V...G...-.-...-....
   5 ...P.GAF..V...G...-.-...-....
   6 ...P.GAF..V...S...-.-...-....
   7 ...P.GAF..V...G...-.-...-....
   8 ...P.SAF..V...S...-.-...-....
   9 ...P.SAF..V...S...-.-...-....
  10 ...P.SAF..V...S...-.-...-....
  11 ...P.SAF..V...S...-.-...-....
  12 ...T.TSF..P...G...G.N...D....
  13 ...P.SAF..V...S...-.-...-....
  14 ...T.TTF..P...G...S.N...E....
  15 ...P.SAF..M...S...-.-...-....
  16 ...T.VAF..P...G...G.S...E....
  17 ...T.VAF..P...G...G.S...E....
  18 a..N.EAF..Pqa.L...S.R...Eev..
  19 ...N.VAF..-...-...E.E...A....
  20 ...T.VAF..P...G...G.N...E....
  21 ...P.QAFdaP...L...TyN...E....
  22 ...P.QAFdtP...L...S.P...Kqvfs
  23 ...I.LVV..P...A...P.FvsaE....
  24 ...V.QEV..PaafL...S.A...Q....
  25 ...EmPVV..P...SaimS.A...E....
  26 ...D.TST..P...L...N.F...Nqty.
  27 ...P.QAFdtP...L...S.P...Kqvfs
  28 ...-.---..-...-...-.-...-....
  29 ...A.NPFgtP...M...G.L...Navys
  30 ...-.QEL..P...G...P.R...Spad.
  31 ...-.QEL..P...G...P.R...Spad.
  32 ...S.VAF..P...G...L.A...Eraa.
  33 ...S.VAF..P...G...L.A...Ervg.
  34 ...E.GWI..T...G...N.E...Rgag.
  35 ...-.-GF..P...G...G.E...L....
  36 ...P.-AL..P...G...T.V...-....
  37 ...-.---..-...-...-.-...-....
  38 ...-.EMF..P...G...R.D...Eyad.
  39 ...-.---..-...-...-.-...-....
  40 aaaS.RAL..P...G...T.-...-....