Best Alignments for T0384

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1ofgA/T0384-1ofgA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ofgA/T0384-1ofgA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.2300e-411.96e-176 1ofgA c.2.1.3
d.81.1.5
1ydwA/T0384-1ydwA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ydwA/T0384-1ydwA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.7092e-321.90e-153
1rydA/T0384-1rydA-t06-global-adpstyle1.a2m 1rydA/T0384-1rydA-t06-global-adpstyle1.al 1.9829e-309.77e-71
1zh8A/T0384-1zh8A-t06-global-adpstyle1.a2m 1zh8A/T0384-1zh8A-t06-global-adpstyle1.al 1.6461e-295.07e-71
1lc0A/T0384-1lc0A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1lc0A/T0384-1lc0A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2982e-211.25e-115 c.2.1.3
d.81.1.4
1f06A/T0384-1f06A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1f06A/T0384-1f06A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.1850e-154.91e-60 1dapA c.2.1.3
d.81.1.3
1drw/T0384-1drw-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1drw/T0384-1drw-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.3881e-144.72e-63 1drw c.2.1.3
d.81.1.3
1ff9A/T0384-1ff9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ff9A/T0384-1ff9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.4123e-131.17e-78 1ff9A c.2.1.3
d.81.1.2
2h63A/T0384-2h63A-t06-global-adpstyle1.a2m 2h63A/T0384-2h63A-t06-global-adpstyle1.al 1.2817e-128.81e-35
1b7gO/T0384-1b7gO-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1b7gO/T0384-1b7gO-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4600e-102.16e-62 1b7gO c.2.1.3
d.81.1.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001