Best Alignments for T0383

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1qynA/T0383-1qynA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1qynA/T0383-1qynA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1354e+006.38e-13 d.33.1.1
1u6zA/T0383-1u6zA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1u6zA/T0383-1u6zA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.9139e+002.50e-08
1mugA/T0383-1mugA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1mugA/T0383-1mugA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.0022e+001.87e-08 1mugA c.18.1.2
1xnzA/T0383-1xnzA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xnzA/T0383-1xnzA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2494e+016.34e-07
2ggcA/T0383-2ggcA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2ggcA/T0383-2ggcA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.3075e+014.86e-05
1fit/T0383-1fit-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1fit/T0383-1fit-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4619e+012.57e-07 1fit d.13.1.1
1oshA/T0383-1oshA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1oshA/T0383-1oshA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4662e+013.80e-02 a.123.1.1
1bh9A/T0383-1bh9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1bh9A/T0383-1bh9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.5994e+016.13e-03 1bh9A a.22.1.3
1ijbA/T0383-1ijbA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ijbA/T0383-1ijbA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.5997e+014.67e-02 c.62.1.1
1f2tA/T0383-1f2tA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1f2tA/T0383-1f2tA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.6288e+016.16e-04 1f2tA c.37.1.12

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001