Best Alignments for T0382

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
2a9uA/T0382-2a9uA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2a9uA/T0382-2a9uA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.7331e+009.39e-08
1h5zA/T0382-1h5zA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1h5zA/T0382-1h5zA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.7462e+004.08e+02 a.104.1.1
1x8vA/T0382-1x8vA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1x8vA/T0382-1x8vA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.9708e+004.04e+00
1hjp/T0382-1hjp-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1hjp/T0382-1hjp-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.2647e+002.31e-08 1hjp a.5.1.1
a.60.2.1
b.40.4.2
1yn9A/T0382-1yn9A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1yn9A/T0382-1yn9A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.3778e+003.96e-06
1trrA/T0382-1trrA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1trrA/T0382-1trrA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.3170e+012.82e-06 1jhgA a.4.12.1
1gmpA/T0382-1gmpA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1gmpA/T0382-1gmpA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4590e+014.39e-01 1rgeA d.1.1.2
1gvhA/T0382-1gvhA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1gvhA/T0382-1gvhA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4871e+019.34e-04 a.1.1.2
b.43.4.2
c.25.1.5
1lrv/T0382-1lrv-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1lrv/T0382-1lrv-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.5335e+011.39e-04 1lrv a.118.1.5
1oyzA/T0382-1oyzA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1oyzA/T0382-1oyzA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.5466e+016.53e-11 a.118.1.16

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001