Best Alignments for T0382

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
2a9uA/T0382-2a9uA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2a9uA/T0382-2a9uA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.4514e-011.25e-08
1d1rA/T0382-1d1rA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1d1rA/T0382-1d1rA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.5900e-013.10e-01 1d1rA d.64.1.1
1xtcA/T0382-1xtcA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xtcA/T0382-1xtcA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.2100e+001.10e+03 1lt3A d.166.1.1
1envA/T0382-1envA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1envA/T0382-1envA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.7900e+006.67e+03 1envA h.3.2.1
1x8vA/T0382-1x8vA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1x8vA/T0382-1x8vA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.7883e+005.02e+03
1gvhA/T0382-1gvhA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1gvhA/T0382-1gvhA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.4572e+005.19e-05 a.1.1.2
b.43.4.2
c.25.1.5
1lrv/T0382-1lrv-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1lrv/T0382-1lrv-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.5772e+003.86e-06 1lrv a.118.1.5
1yn9A/T0382-1yn9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1yn9A/T0382-1yn9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.5892e+002.15e-05
1cuk/T0382-1cuk-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1cuk/T0382-1cuk-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.1526e+002.34e-12 1hjp a.5.1.1
a.60.2.1
b.40.4.2
2a5dB/T0382-2a5dB-t06-local-adpstyle1.a2m 2a5dB/T0382-2a5dB-t06-local-adpstyle1.al 9.2499e+006.64e+00

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001