Best Alignments for T0382

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
2a9uA/T0382-2a9uA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2a9uA/T0382-2a9uA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.8314e-012.57e-08
1d1rA/T0382-1d1rA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1d1rA/T0382-1d1rA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.2000e-015.39e+00 1d1rA d.64.1.1
1xtcA/T0382-1xtcA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xtcA/T0382-1xtcA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.5500e+001.60e+03 1lt3A d.166.1.1
1envA/T0382-1envA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1envA/T0382-1envA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.1600e+009.31e+03 1envA h.3.2.1
1x8vA/T0382-1x8vA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1x8vA/T0382-1x8vA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.1481e+001.69e+03
1h5zA/T0382-1h5zA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1h5zA/T0382-1h5zA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.3445e+009.89e+03 a.104.1.1
2a5dB/T0382-2a5dB-t04-local-adpstyle1.a2m 2a5dB/T0382-2a5dB-t04-local-adpstyle1.al 1.0018e+018.93e+00
1yn9A/T0382-1yn9A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1yn9A/T0382-1yn9A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0231e+017.41e-05
1rgoA/T0382-1rgoA-t04-global-adpstyle1.a2m 1rgoA/T0382-1rgoA-t04-global-adpstyle1.al 1.2170e+014.27e-02 g.66.1.1
g.66.1.1
1lrv/T0382-1lrv-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1lrv/T0382-1lrv-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2610e+017.44e-05 1lrv a.118.1.5

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001