Best Alignments for T0381

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
2g7uA/T0381-2g7uA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2g7uA/T0381-2g7uA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.1369e-151.81e-35
1mkmA/T0381-1mkmA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1mkmA/T0381-1mkmA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.3577e-072.99e-17 a.4.5.33
d.110.2.2
1r7jA/T0381-1r7jA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1r7jA/T0381-1r7jA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0584e-033.11e-16 a.4.5.49
2fbhA/T0381-2fbhA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fbhA/T0381-2fbhA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.3551e-032.77e-16
2gauA/T0381-2gauA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2gauA/T0381-2gauA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.6147e-031.17e-14
1ft9A/T0381-1ft9A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ft9A/T0381-1ft9A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.6464e-036.76e-15 1ft9A a.4.5.4
b.82.3.1
1q1hA/T0381-1q1hA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1q1hA/T0381-1q1hA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.6946e-034.88e-13 a.4.5.41
1qbjA/T0381-1qbjA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1qbjA/T0381-1qbjA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.3049e-031.04e-14 1qbjA a.4.5.19
1u2wA/T0381-1u2wA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1u2wA/T0381-1u2wA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.2476e-031.21e-16
1i6xA/T0381-1i6xA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1i6xA/T0381-1i6xA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.1486e-032.12e-11 a.4.5.4
b.82.3.2

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001