Best Alignments for T0381

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
2g7uA/T0381-2g7uA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2g7uA/T0381-2g7uA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.7842e-143.04e-32
1mkmA/T0381-1mkmA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1mkmA/T0381-1mkmA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4769e-112.30e-28 a.4.5.33
d.110.2.2
1r7jA/T0381-1r7jA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1r7jA/T0381-1r7jA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.0528e-059.41e-21 a.4.5.49
1q1hA/T0381-1q1hA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1q1hA/T0381-1q1hA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.9871e-051.77e-17 a.4.5.41
2fbhA/T0381-2fbhA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fbhA/T0381-2fbhA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.4343e-055.42e-20
1r1tA/T0381-1r1tA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1r1tA/T0381-1r1tA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2186e-044.79e-24 a.4.5.5
1on2A/T0381-1on2A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1on2A/T0381-1on2A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2256e-047.80e-23 a.4.5.24
a.76.1.1
1ulyA/T0381-1ulyA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ulyA/T0381-1ulyA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.3669e-049.40e-21
1lnwA/T0381-1lnwA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1lnwA/T0381-1lnwA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.1459e-041.62e-22 a.4.5.28
1u2wA/T0381-1u2wA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1u2wA/T0381-1u2wA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.5844e-045.93e-22

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001