Best Alignments for T0380

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1dnlA/T0380-1dnlA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1dnlA/T0380-1dnlA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.8128e-169.48e-69 1ci0A b.45.1.1
1t9mA/T0380-1t9mA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1t9mA/T0380-1t9mA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.1539e-142.98e-62
2fhqA/T0380-2fhqA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fhqA/T0380-2fhqA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.8856e-147.01e-63
1rfeA/T0380-1rfeA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1rfeA/T0380-1rfeA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.3042e-141.05e-59
1ty9A/T0380-1ty9A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ty9A/T0380-1ty9A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.3105e-133.22e-62
2fg9A/T0380-2fg9A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fg9A/T0380-2fg9A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.4193e-113.30e-52
2a2jA/T0380-2a2jA-t04-global-adpstyle1.a2m 2a2jA/T0380-2a2jA-t04-global-adpstyle1.al 5.7162e-114.04e-28
2asfA/T0380-2asfA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2asfA/T0380-2asfA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.7493e-112.56e-56
2aq6A/T0380-2aq6A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2aq6A/T0380-2aq6A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.0128e-105.37e-40
2arzA/T0380-2arzA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2arzA/T0380-2arzA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.6025e-095.06e-46

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001