Best Alignments for T0379

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1jud/T0379-1jud-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1jud/T0379-1jud-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.9900e-292.39e-89 1qq5A c.108.1.1
1j97A/T0379-1j97A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1j97A/T0379-1j97A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.8900e-244.71e-60 1f5sA c.108.1.4
2b0cA/T0379-2b0cA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2b0cA/T0379-2b0cA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.6374e-222.48e-88
1x42A/T0379-1x42A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1x42A/T0379-1x42A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.2307e-226.62e-85
2fdrA/T0379-2fdrA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fdrA/T0379-2fdrA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.5516e-214.95e-91
2gfhA/T0379-2gfhA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2gfhA/T0379-2gfhA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.1015e-212.11e-89
1te2A/T0379-1te2A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1te2A/T0379-1te2A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.2571e-211.64e-90 c.108.1.6
1rqlA/T0379-1rqlA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1rqlA/T0379-1rqlA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.6000e-218.17e-71 c.108.1.3
2ah5A/T0379-2ah5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2ah5A/T0379-2ah5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.1806e-211.44e-81
2go7A/T0379-2go7A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2go7A/T0379-2go7A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.4851e-202.94e-83

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001