Best Alignments for T0379

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
2b0cA/T0379-2b0cA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2b0cA/T0379-2b0cA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.9339e-057.87e-18
2f3yA/T0379-2f3yA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2f3yA/T0379-2f3yA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.0236e-014.22e-09
2aucA/T0379-2aucA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2aucA/T0379-2aucA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.2583e-016.17e-05
1wdcC/T0379-1wdcC-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wdcC/T0379-1wdcC-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.4556e-014.31e-08 1wdcC a.39.1.5
1yruB/T0379-1yruB-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1yruB/T0379-1yruB-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.8719e-012.92e-10
3cln/T0379-3cln-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3cln/T0379-3cln-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.0458e-011.64e-07 1cll a.39.1.5
1wlzA/T0379-1wlzA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wlzA/T0379-1wlzA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.9926e-012.36e-05
1mvwB/T0379-1mvwB-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1mvwB/T0379-1mvwB-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.0299e-014.44e-08 i.15.1.1
1z5hA/T0379-1z5hA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1z5hA/T0379-1z5hA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.8785e-012.41e-02
1xfxO/T0379-1xfxO-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xfxO/T0379-1xfxO-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4019e+003.64e-04

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001