Best Alignments for T0378

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1gz0A/T0378-1gz0A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1gz0A/T0378-1gz0A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.0223e-257.04e-129 c.116.1.1
d.79.3.3
1x7oA/T0378-1x7oA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1x7oA/T0378-1x7oA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.2604e-232.85e-117
1v2xA/T0378-1v2xA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1v2xA/T0378-1v2xA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.2043e-192.33e-80 c.116.1.1
1zjrA/T0378-1zjrA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1zjrA/T0378-1zjrA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.4662e-187.51e-82
1z85A/T0378-1z85A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1z85A/T0378-1z85A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.3078e-018.11e-29
1h1yA/T0378-1h1yA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1h1yA/T0378-1h1yA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.7827e-011.84e-16 c.1.2.2
1qwgA/T0378-1qwgA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1qwgA/T0378-1qwgA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.9257e-014.83e-20 c.1.27.1
1j8yF/T0378-1j8yF-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1j8yF/T0378-1j8yF-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.3203e-017.71e-21 1ng1 a.24.13.1
c.37.1.10
1swvA/T0378-1swvA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1swvA/T0378-1swvA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.9018e-011.84e-09
1rqlA/T0378-1rqlA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1rqlA/T0378-1rqlA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.4644e-013.46e-10 c.108.1.3

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001