Best Alignments for T0377

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1zpwX/T0377-1zpwX-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1zpwX/T0377-1zpwX-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.6553e-122.49e-38
2ivyA/T0377-2ivyA-simplesw-adpstyle1.a2m 2ivyA/T0377-2ivyA-simplesw-adpstyle1.al 6.3949e-113.26e-63
1vgjA/T0377-1vgjA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vgjA/T0377-1vgjA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.0934e-011.07e-13
1vdxA/T0377-1vdxA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vdxA/T0377-1vdxA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0617e+002.15e-14
1oz9A/T0377-1oz9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1oz9A/T0377-1oz9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.9743e+008.59e-08 d.92.1.15
1uw1A/T0377-1uw1A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1uw1A/T0377-1uw1A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.1951e+001.21e-10 k.42.1.1
1ta9A/T0377-1ta9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ta9A/T0377-1ta9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.7242e+008.10e-13
1fmcA/T0377-1fmcA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1fmcA/T0377-1fmcA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.7632e+001.39e-09 1cydA c.2.1.2
1ydyA/T0377-1ydyA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ydyA/T0377-1ydyA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.0574e+003.06e+01
1m7bA/T0377-1m7bA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1m7bA/T0377-1m7bA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.1469e+001.92e-06 c.37.1.8

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001