Best Alignments for T0376

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1o5kA/T0376-1o5kA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1o5kA/T0376-1o5kA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.3663e-305.08e-194 c.1.10.1
1xkyA/T0376-1xkyA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xkyA/T0376-1xkyA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.2202e-301.81e-202
1yxcA/T0376-1yxcA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1yxcA/T0376-1yxcA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.7047e-296.03e-191
2a6lA/T0376-2a6lA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2a6lA/T0376-2a6lA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.5637e-294.92e-190
2a6nA/T0376-2a6nA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2a6nA/T0376-2a6nA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.7856e-291.59e-190
1xxxA/T0376-1xxxA-t2k-global-adpstyle1.a2m 1xxxA/T0376-1xxxA-t2k-global-adpstyle1.al 3.5788e-132.73e-90
1y0eA/T0376-1y0eA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1y0eA/T0376-1y0eA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2081e-032.32e-37
1ep3A/T0376-1ep3A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ep3A/T0376-1ep3A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.8017e-033.68e-39 2dorA c.1.4.1
2b4gA/T0376-2b4gA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2b4gA/T0376-2b4gA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.7347e-038.74e-46

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001