Best Alignments for T0376

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1xkyA/T0376-1xkyA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xkyA/T0376-1xkyA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.6350e-371.88e-202
1o5kA/T0376-1o5kA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1o5kA/T0376-1o5kA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.0948e-373.89e-191 c.1.10.1
1yxcA/T0376-1yxcA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1yxcA/T0376-1yxcA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.1181e-364.60e-189
1tx2A/T0376-1tx2A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1tx2A/T0376-1tx2A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4214e-061.61e-37 c.1.21.1
1p0kA/T0376-1p0kA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1p0kA/T0376-1p0kA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4654e-051.08e-40 c.1.4.1
1y0eA/T0376-1y0eA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1y0eA/T0376-1y0eA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.1699e-052.70e-34
1zfjA/T0376-1zfjA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1zfjA/T0376-1zfjA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.0542e-042.81e-30 1ak5 c.1.5.1
d.37.1.1
d.37.1.1
1thfD/T0376-1thfD-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1thfD/T0376-1thfD-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.1385e-043.77e-33 1thfD c.1.2.1
1gteA/T0376-1gteA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1gteA/T0376-1gteA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.2135e-044.66e-47 a.1.2.2
c.1.4.1
c.3.1.1
c.4.1.1
d.58.1.5
1xg4A/T0376-1xg4A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xg4A/T0376-1xg4A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.8934e-047.66e-36

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001