Best Alignments for T0375

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1rkd/T0375-1rkd-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1rkd/T0375-1rkd-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4427e-402.83e-169 1rkd c.72.1.1
2fv7A/T0375-2fv7A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fv7A/T0375-2fv7A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.7333e-381.55e-172
2afbA/T0375-2afbA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2afbA/T0375-2afbA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.8812e-341.27e-147
2dcnA/T0375-2dcnA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2dcnA/T0375-2dcnA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.3708e-328.87e-142
2abqA/T0375-2abqA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2abqA/T0375-2abqA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.8170e-321.23e-141
2f02A/T0375-2f02A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2f02A/T0375-2f02A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.9324e-308.19e-134
2absA/T0375-2absA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2absA/T0375-2absA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.9905e-278.57e-136
2ajrA/T0375-2ajrA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2ajrA/T0375-2ajrA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.7702e-251.77e-116
1ub0A/T0375-1ub0A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ub0A/T0375-1ub0A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.9173e-241.02e-92 c.72.1.2
1vi9A/T0375-1vi9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vi9A/T0375-1vi9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.9416e-181.00e-80 c.72.1.5

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001