Best Alignments for T0374

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
2ge3A/T0374-2ge3A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2ge3A/T0374-2ge3A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2955e-209.28e-98
1yvoA/T0374-1yvoA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1yvoA/T0374-1yvoA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.2173e-206.41e-87
1vhsA/T0374-1vhsA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vhsA/T0374-1vhsA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.3286e-194.69e-83 d.108.1.1
2fe7A/T0374-2fe7A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fe7A/T0374-2fe7A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.7725e-182.41e-76
2ae6A/T0374-2ae6A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2ae6A/T0374-2ae6A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2387e-175.33e-82
2cy2A/T0374-2cy2A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2cy2A/T0374-2cy2A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.3918e-174.02e-82
2beiA/T0374-2beiA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2beiA/T0374-2beiA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.1069e-171.90e-72
1z4eA/T0374-1z4eA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1z4eA/T0374-1z4eA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.9262e-169.81e-76
1wwzA/T0374-1wwzA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wwzA/T0374-1wwzA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.1932e-164.73e-67
1yr0A/T0374-1yr0A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1yr0A/T0374-1yr0A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.3545e-154.22e-94

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001