Best Alignments for T0374

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1yr0A/T0374-1yr0A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1yr0A/T0374-1yr0A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.7047e-193.34e-73
1yvoA/T0374-1yvoA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1yvoA/T0374-1yvoA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1079e-184.67e-69
2ge3A/T0374-2ge3A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2ge3A/T0374-2ge3A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.1290e-186.57e-74
2fe7A/T0374-2fe7A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fe7A/T0374-2fe7A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.2306e-182.41e-76
2bl1A/T0374-2bl1A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2bl1A/T0374-2bl1A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.9804e-187.14e-64
2beiA/T0374-2beiA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2beiA/T0374-2beiA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.4399e-171.53e-71
1tiqA/T0374-1tiqA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1tiqA/T0374-1tiqA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.5722e-175.42e-74 d.108.1.1
2cy2A/T0374-2cy2A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2cy2A/T0374-2cy2A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.4174e-168.26e-67
1z4eA/T0374-1z4eA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1z4eA/T0374-1z4eA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.7648e-168.51e-65
1u6mA/T0374-1u6mA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1u6mA/T0374-1u6mA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.2161e-153.22e-59

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001