Best Alignments for T0373

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
2a61A/T0373-2a61A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2a61A/T0373-2a61A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.2223e-206.78e-74
2fbhA/T0373-2fbhA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fbhA/T0373-2fbhA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.7233e-193.62e-69
1lnwA/T0373-1lnwA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1lnwA/T0373-1lnwA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.3594e-194.83e-73 a.4.5.28
2fbiA/T0373-2fbiA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fbiA/T0373-2fbiA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.2704e-183.56e-66
2ethA/T0373-2ethA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2ethA/T0373-2ethA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4482e-178.93e-66
1z91A/T0373-1z91A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1z91A/T0373-1z91A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.3534e-165.46e-49
2fxaA/T0373-2fxaA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fxaA/T0373-2fxaA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.7873e-125.21e-55
1p4xA/T0373-1p4xA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1p4xA/T0373-1p4xA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.9751e-122.31e-44 a.4.5.28
a.4.5.28
1on2A/T0373-1on2A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1on2A/T0373-1on2A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.8364e-091.55e-39 a.4.5.24
a.76.1.1
1sfxA/T0373-1sfxA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1sfxA/T0373-1sfxA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.0709e-083.67e-35 a.4.5.50

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001