# TARGET T0373 # Using neural net t2k-5740-IDaaHr-5-15-7-15-9-15-13-ebghstl-seeded.net # This is a 4-layer network, with # window units # 5 15 # 7 15 # 9 15 # 13 7 (1 EBGHSTL ) # The input amino acid frequencies were determined from # alignment T0373.t2k-thin90.a2m.gz # with weighted counts, using HenikoffWeight(-1 bits/column, 1) # Counts were regularized to probabilities using # /projects/compbio/lib/recode3.20comp # Total sequence weight for alignment was 1386 # Pos AA E B G H S T C 10N 1S 5N 5N 5N 5N 5N 5N 5N 1 M 0.001 0.001 0.001 0.001 0.015 0.002 0.979 2 P 0.001 0.010 0.004 0.016 0.013 0.029 0.927 3 T 0.001 0.011 0.024 0.079 0.281 0.112 0.492 4 N 0.001 0.008 0.064 0.231 0.229 0.168 0.299 5 Q 0.001 0.003 0.111 0.412 0.057 0.180 0.236 6 D 0.001 0.002 0.071 0.571 0.058 0.116 0.182 7 L 0.002 0.003 0.030 0.778 0.041 0.051 0.095 8 Q 0.002 0.002 0.007 0.883 0.022 0.023 0.061 9 L 0.001 0.001 0.002 0.958 0.009 0.011 0.019 10 A 0.001 0.001 0.001 0.988 0.003 0.004 0.004 11 A 0.001 0.001 0.001 0.994 0.001 0.003 0.002 12 H 0.001 0.001 0.001 0.997 0.001 0.002 0.001 13 L 0.001 0.001 0.001 0.997 0.001 0.001 0.001 14 R 0.001 0.001 0.001 0.997 0.001 0.002 0.001 15 S 0.001 0.001 0.001 0.995 0.001 0.003 0.001 16 Q 0.001 0.001 0.001 0.994 0.001 0.004 0.001 17 V 0.001 0.001 0.001 0.992 0.001 0.005 0.001 18 T 0.001 0.001 0.001 0.988 0.002 0.008 0.002 19 T 0.001 0.001 0.001 0.984 0.002 0.010 0.004 20 L 0.001 0.001 0.001 0.978 0.003 0.012 0.006 21 T 0.001 0.001 0.001 0.968 0.005 0.021 0.005 22 R 0.001 0.001 0.001 0.936 0.006 0.047 0.009 23 R 0.001 0.001 0.002 0.925 0.010 0.039 0.022 24 L 0.001 0.001 0.003 0.933 0.013 0.027 0.023 25 R 0.001 0.001 0.006 0.931 0.014 0.029 0.018 26 R 0.001 0.001 0.008 0.928 0.011 0.036 0.016 27 E 0.001 0.001 0.006 0.925 0.013 0.035 0.019 28 A 0.002 0.001 0.013 0.886 0.024 0.049 0.024 29 Q 0.002 0.001 0.043 0.817 0.018 0.094 0.025 30 A 0.001 0.003 0.071 0.598 0.045 0.251 0.030 31 D 0.001 0.001 0.026 0.159 0.080 0.703 0.030 32 P 0.001 0.002 0.008 0.014 0.077 0.766 0.133 33 V 0.001 0.012 0.002 0.004 0.206 0.014 0.760 34 Q 0.003 0.011 0.001 0.006 0.076 0.003 0.900 35 F 0.001 0.001 0.062 0.876 0.015 0.035 0.012 36 S 0.001 0.001 0.040 0.925 0.004 0.024 0.007 37 Q 0.001 0.001 0.015 0.969 0.003 0.006 0.006 38 L 0.002 0.001 0.001 0.990 0.001 0.001 0.003 39 V 0.004 0.001 0.001 0.987 0.001 0.003 0.004 40 V 0.004 0.001 0.001 0.987 0.001 0.006 0.001 41 L 0.007 0.001 0.002 0.983 0.002 0.004 0.002 42 G 0.004 0.001 0.004 0.985 0.002 0.004 0.002 43 A 0.003 0.001 0.006 0.975 0.002 0.012 0.002 44 I 0.002 0.002 0.018 0.931 0.005 0.035 0.008 45 D 0.006 0.003 0.020 0.822 0.026 0.107 0.016 46 R 0.005 0.002 0.022 0.640 0.035 0.245 0.051 47 L 0.004 0.007 0.022 0.310 0.140 0.223 0.295 48 G 0.005 0.004 0.024 0.038 0.230 0.274 0.425 49 G 0.023 0.003 0.026 0.028 0.506 0.173 0.241 50 D 0.068 0.022 0.016 0.019 0.219 0.086 0.571 51 V 0.068 0.036 0.002 0.008 0.192 0.007 0.688 52 T 0.040 0.036 0.001 0.009 0.040 0.002 0.872 53 P 0.001 0.001 0.014 0.961 0.005 0.013 0.006 54 S 0.001 0.001 0.016 0.960 0.003 0.016 0.004 55 E 0.001 0.001 0.010 0.978 0.003 0.006 0.003 56 L 0.001 0.001 0.002 0.989 0.003 0.003 0.003 57 A 0.001 0.001 0.003 0.979 0.004 0.008 0.005 58 A 0.001 0.001 0.006 0.963 0.002 0.026 0.003 59 A 0.001 0.001 0.011 0.898 0.005 0.081 0.005 60 E 0.002 0.002 0.017 0.430 0.023 0.510 0.016 61 R 0.004 0.006 0.014 0.082 0.066 0.699 0.129 62 M 0.011 0.032 0.006 0.020 0.344 0.032 0.556 63 R 0.015 0.011 0.006 0.011 0.135 0.015 0.808 64 S 0.002 0.002 0.200 0.512 0.093 0.148 0.042 65 S 0.001 0.001 0.165 0.623 0.049 0.135 0.026 66 N 0.002 0.005 0.125 0.718 0.021 0.095 0.034 67 L 0.001 0.001 0.014 0.947 0.006 0.015 0.015 68 A 0.001 0.001 0.006 0.976 0.004 0.008 0.005 69 A 0.001 0.001 0.004 0.982 0.002 0.008 0.003 70 L 0.001 0.001 0.002 0.991 0.001 0.005 0.001 71 L 0.001 0.001 0.001 0.994 0.001 0.003 0.001 72 R 0.001 0.001 0.001 0.993 0.001 0.005 0.001 73 E 0.001 0.001 0.001 0.992 0.001 0.005 0.001 74 L 0.001 0.001 0.001 0.993 0.001 0.004 0.001 75 E 0.001 0.001 0.004 0.977 0.002 0.013 0.003 76 R 0.001 0.001 0.010 0.883 0.005 0.096 0.004 77 G 0.001 0.001 0.006 0.141 0.010 0.841 0.002 78 G 0.002 0.001 0.002 0.010 0.047 0.879 0.059 79 L 0.103 0.005 0.002 0.004 0.116 0.019 0.752 80 I 0.782 0.046 0.003 0.003 0.011 0.003 0.152 81 V 0.842 0.004 0.004 0.005 0.011 0.003 0.130 82 R 0.799 0.007 0.004 0.004 0.024 0.005 0.156 83 H 0.596 0.003 0.003 0.003 0.057 0.009 0.329 84 A 0.248 0.021 0.003 0.002 0.207 0.012 0.506 85 D 0.080 0.019 0.002 0.003 0.074 0.005 0.817 86 P 0.011 0.002 0.360 0.035 0.074 0.409 0.108 87 Q 0.002 0.001 0.247 0.012 0.084 0.635 0.019 88 D 0.006 0.006 0.358 0.009 0.149 0.376 0.096 89 G 0.040 0.004 0.048 0.014 0.444 0.123 0.327 90 R 0.332 0.016 0.020 0.005 0.238 0.056 0.333 91 R 0.770 0.030 0.008 0.002 0.021 0.007 0.163 92 T 0.902 0.003 0.006 0.004 0.012 0.006 0.067 93 R 0.944 0.002 0.003 0.002 0.012 0.004 0.033 94 V 0.929 0.002 0.002 0.002 0.009 0.003 0.053 95 S 0.816 0.007 0.001 0.002 0.016 0.002 0.156 96 L 0.408 0.033 0.001 0.004 0.051 0.003 0.500 97 S 0.057 0.003 0.001 0.005 0.057 0.003 0.875 98 S 0.001 0.001 0.023 0.834 0.031 0.096 0.015 99 E 0.001 0.001 0.017 0.898 0.017 0.058 0.009 100 G 0.001 0.001 0.012 0.950 0.005 0.029 0.004 101 R 0.001 0.001 0.003 0.976 0.008 0.006 0.006 102 R 0.001 0.001 0.004 0.975 0.004 0.010 0.006 103 N 0.001 0.001 0.006 0.968 0.003 0.019 0.004 104 L 0.001 0.001 0.005 0.965 0.006 0.020 0.004 105 Y 0.001 0.001 0.008 0.932 0.006 0.049 0.004 106 G 0.001 0.001 0.008 0.862 0.006 0.116 0.008 107 N 0.001 0.001 0.008 0.837 0.026 0.076 0.052 108 R 0.001 0.001 0.012 0.860 0.030 0.053 0.043 109 A 0.001 0.001 0.011 0.876 0.026 0.052 0.034 110 K 0.001 0.001 0.006 0.909 0.018 0.033 0.033 111 R 0.001 0.001 0.002 0.939 0.014 0.021 0.022 112 E 0.001 0.001 0.001 0.962 0.009 0.015 0.012 113 E 0.001 0.001 0.001 0.973 0.006 0.012 0.009 114 W 0.001 0.001 0.001 0.976 0.005 0.009 0.009 115 L 0.001 0.001 0.001 0.971 0.004 0.016 0.007 116 V 0.001 0.001 0.002 0.946 0.005 0.039 0.007 117 R 0.001 0.001 0.003 0.931 0.010 0.041 0.014 118 A 0.001 0.001 0.008 0.891 0.024 0.046 0.029 119 M 0.001 0.001 0.044 0.820 0.025 0.074 0.036 120 H 0.001 0.002 0.249 0.453 0.040 0.210 0.046 121 A 0.001 0.001 0.153 0.155 0.032 0.640 0.020 122 C 0.001 0.003 0.093 0.055 0.037 0.732 0.080 123 L 0.001 0.005 0.003 0.004 0.278 0.009 0.701 124 D 0.001 0.002 0.001 0.003 0.027 0.001 0.966 125 E 0.001 0.001 0.016 0.942 0.012 0.022 0.008 126 S 0.001 0.001 0.013 0.966 0.003 0.014 0.004 127 E 0.001 0.001 0.007 0.981 0.001 0.006 0.004 128 R 0.001 0.001 0.001 0.994 0.001 0.003 0.001 129 A 0.001 0.001 0.001 0.984 0.003 0.009 0.003 130 L 0.001 0.001 0.001 0.982 0.001 0.014 0.002 131 L 0.001 0.001 0.001 0.986 0.003 0.006 0.005 132 A 0.001 0.001 0.001 0.990 0.003 0.005 0.002 133 A 0.001 0.001 0.001 0.986 0.001 0.011 0.001 134 A 0.001 0.001 0.001 0.984 0.001 0.013 0.003 135 G 0.001 0.001 0.001 0.990 0.002 0.006 0.002 136 P 0.001 0.001 0.001 0.985 0.003 0.009 0.002 137 L 0.001 0.001 0.001 0.983 0.002 0.012 0.003 138 L 0.001 0.001 0.002 0.979 0.003 0.010 0.005 139 T 0.001 0.001 0.007 0.966 0.003 0.021 0.003 140 R 0.001 0.001 0.010 0.864 0.004 0.117 0.005 141 L 0.001 0.001 0.016 0.795 0.010 0.155 0.023 142 A 0.001 0.005 0.034 0.560 0.083 0.132 0.185 143 Q 0.002 0.002 0.112 0.405 0.060 0.313 0.105 144 F 0.003 0.004 0.112 0.298 0.175 0.280 0.129 145 E 0.005 0.016 0.034 0.174 0.367 0.122 0.283 146 E 0.005 0.011 0.006 0.032 0.016 0.076 0.853 147 P 0.001 0.001 0.001 0.001 0.001 0.001 0.998