(c) 1992-2000 Regents of the University of California, Santa Cruz
Sequence Alignment and Modeling Software System
http://www.soe.ucsc.edu/research/compbio/sam.html

Citations (SAM, SAM-T99, HMMs)

Sequence numbers correspond to the following labels:

    • T0372 conserved hypothetical protein, Bacteroides thetaiotaomicron, 305 res
              10            20        30        40        50        60 
              |             |         |         |         |         | 
   1 MIPFKDITLADRDTITAFT....MKSDRRNCDLSFSNLCSWRFLYDTQFAVIDDFLVFKFWAGEQ
   2 MIAFRDITIQDKDTITAYT....MNSCRRNCDLSFSNLCSWRFLYHTKFAIINNFLVFKFWAGDE
   3 MIAFRDITIQDKDTITAYT....MNSCRRNCDLSFSNLCSWRFLYHTKFAIINNFLVFKFWAGDE
   4 MIPFKDITLADRDTITAFT....MKSDRRNCDLSFSNLCSWRFLYDTQFAVIDDFLVFKFWAGEQ
   5 ---WKPIDIEDRETLEGFF....RSEELSVSDFSFTNLYLWHFSRSISYAIIEDLLCIKTQYHGE
   6 MIDFKKIEMRDKEWVKPLL....EAADLGGCHQNFTNLFSWSGTYHYQVAQVEDYLVIKGRLGET
   7 MINFKKVELADKQWMGPLI....TLGEMSSSHQNFTNIFAWSEIYHYRVARVSDYLVVKGRLQNG
   8 --DFKPVMLSDRAFFESHY....AFFPQTHSSNTFTNMVCWNHFTPYRYAYVNGNVIISCTTEGV
   9 --DFKPVTLADREFFERHS....ELYPQTHSSNTFTNMVCWNHFTQYRYAYVNGNIIISGTTGGI
  10 ---FYKIDISDKRIFDEYF....KAFQPEIADLTFTNLFMWDPFYDINFTEEDGFLLIMAKPYNQ
  11 MLQFSPLTLEDKEIFDKYI....KPYKFKTSEYSFTNQYLWRKGSDVTYTILNDVLIIKKVDYDG
  12 --DFKPVTLADRAFFERHY....ALYPQTHSDNTFTSMICWNHFMHYRYAYVKGNVILACTAAGV
  13 --EFKKIELEDRTLLEPFT....NQKGRWLSDMNFSNMFMWRHSREISYTFLQEHLIVQTRYPHQ
  14 --EFKPLTMDVMEEYLTLF....SGTPSRASDYSFTNLWGWANEYGLEVGRTPNLFWIRQTRPEV
  15 ---FEEITLAHKDLFSRFL....QTQKIVLSDVSFTNCFLWQHARLIQVAVIRDCLVIQTTYENQ
  16 --DFSPVTLDAMQDYLALF....ARTPRRASDYSFTNLWGWAEHYGLEWRFEHGLCWLRQTLPEV
  17 --AFSPVHPSKFDNYTLLW....EMTPQHSSDYTLTNIWGWKDFYGLEWMFESGLCWIRQTRH--
  18 ---FKDIELNSKKELDPYF....DLVDYEACEYCFSTLYMWQHVYKTGYYIGEDFAVLVGEYEGD
  19 ---FEKITLAHKDLFSRFL....STQKIVLSDVSFTNCFLWQHARLIQVAVIRDCLVIQTTYENQ
  20 -IKFKPVEPADRSAITTIT....FSSVARICDLAFSNLYCWSFVYGTSWAIVEGCLIIRFKPKSR
  21 ---FEKITLAHKDLFSRFL....SAQKIVLSDVSFTNCFLWQHARLIQVAVIRDCLVIQTTYENQ
  22 --DFHPIELEDKDIFDRIY....RDYPIQHSENTFGTLFCWRSYGHYKICEHEGCLIIKGETENY
  23 MLDFKPIELKDRELFHEYL....KDYDFLTYEYSFLTLYIWRKMYNTEFAIVDDTIVIKKRTANN
  24 --DSRPLALADKPLLDALF....TELQPRVSELTFANLYLFRGIHDYRLTRLGDALVVLGRGYGG
  25 ---ARPLFLADKPFFAAVF....AELQPRVSELTFANLYLFREAHDYRLTRVGDSPVVLGKGYDG
  26 ---KRPLALDDKPMLDGIF....AGLQPRVSEFTFANLYLFRSVHAYCLTMVGDALVVMGKGYAG
  27 --------------IEEY-....TKNRFEICDLSFSNLLLWSIGENTEYEIENDVLTIRSVYMGD
  28 -PEFAPISLDMQSEMEFYL....KRLPDGISELTFLNLYLFRHNYKYQVTKTEKLLIIIGEYKGE
  29 ---LKRFTIYTKPIMESYL....SKLSVDLSDYTFAANFIWLANSSGFYAIINKSFCLFVMTGGE
  30 --KLKHFDLSAKEKMERYL....QEVHVDVSDYTFAANYIWLSKSSGFFTIIDDTFCLFVLNGSE
  31 ----ERINQIDSSHFYSAL....TYYSWSFYGLNISYQFHEKGISFFGEINLEKNLLHEVLQDKY
  32 ----ERINQIDSSHFYSAL....TYYSWSFYGLNISYQFHEKGISFFGEINLEKNLLHEVLQDKY
  33 ---FRLLTVSDYSRLKPFF....NPLKYPLAIYSLSSLIAWNNELNPTYYTMEDNLLLLMTAGTL
  34 -----------KPLMEHYLselgNELEVDISDYTFAANYIWLENASGFYAIIEDSFCLFSMAGSE
  35 ----EPLNLSHQTLLTQKF....RQMSLVISEYSFANLYLFRKQHEYEVIFGEDIYIKGIDRGKL
  36 ---------STLTLLLWTY....YGYDIYFEYLKDKNIVLFYAQANEELKIIEQNKIATQFIGKF
  37 -------------------....--------PLSALNLYTWKYYDSKVYFRVEDKVIYLYLFNNW
  38 --------------IEEY-....TKNRFEICDLSFSNLLLWSTGENTEYEIENDVLTIRSVYMGE
  39 -------------------....------------------------------------------
  40 -------------------....----------------------------GEDIMYFMYRRKND


                        70             80           90                 
                        |              |            |                 
   1 .....L....AYM..MPVGNG...D..LKAVLRKLIEDA...DKEKHN..F.....CMLGVCS..
   2 .....L....AYM..MPVGEG...N..LEEVLNELIEDA...RQEGEP..F.....CMLGVCS..
   3 .....L....AYM..MPVGEG...N..LEEVLNELIEDA...RQEGEP..F.....CMLGVCS..
   4 .....L....AYM..MPVGNG...D..LKAVLRKLIEDA...DKEKHN..F.....CMLGVCS..
   5 h....P....FLF..FPLGKG...E..KRGVIERLMECF...ESRAIP..F.....TMRSLGE..
   6 .....Y....YYF..YPAGTG...D..VQPVLEAMKKDA...QENGHE..F.....IVLGISP..
   7 e....Q....YYF..YPAGKG...D..PKSVIETMKQDA...ADCGHK..F.....IMLGVSP..
   8 .....T....RFH..PPIGPR...N..PELMRELIRLAL...DV--SD..E.....TPIELID..
   9 .....T....RFH..PPIGPR...D..PELMRELIQLAM...--KVSD..N.....TPLIFID..
  10 .....P....PFL..HGPVGV...D..TNKLPIVIEKAK...KYFETQgyK.....FMLKRAS..
  11 .....T....TQF..TQPIGYekeN..LKEIVDELIKYR...QKHNMD..Y.....LFKDAEE..
  12 .....T....RLH..PPVGPR...D..PELMKEVIRLAL...DMGNNN..K.....PLMLIDP..
  13 n....P....FVF..YPLGAG...D..KKPIIESLIQFY...KDLSLP..L.....ELHSLQS..
  14 .....R....YWA..PVGDWN...A..VADWA-----NC...PMMTAG..R.....TFIRVPQ..
  15 .....K....PFY..FYPIGK...R..PHECVKELLE--...--LEKN..L.....RFHSLTL..
  16 .....R....YWA..PVGPWG...D..ID------WASC...TCLGKG..M.....EFIRVPE..
  17 .....V....DGA..DYIFWA...P..IGDWNSIDWVNL...PLFKRG..L.....HMQRVPE..
  18 .....S....FSI..LPLAKK...Dk.LPEVVDFVLEYF...SKNNKK..I.....YLRGITT..
  19 .....K....PFY..FYPIGK...R..PHECVKELLK--...--LEKN..L.....RFHSLTL..
  20 sh...P....VYL..FPVGAD...PeqVVAAAHRLKAEV...VHEDYP..L.....IFMGVTP..
  21 .....K....PFY..FYPIGK...N..AFECVKELLK--...--LEKN..L.....RFHSLTL..
  22 .....H....SYR..FPIGPV...K..PDVFHATIK--L...AQNLGE..E.....APLLILE..
  23 .....G....TYF..MQPIGA...D..KSKIADITLKLN...TLRKNN..P.....DFKYLYGdv
  24 .....E....AYA..LPPLSG...D..VTGALRTLLAD-...------..-.....GFTIYGA..
  25 .....E....EYF..LPPLGG...D..VAGALRVLL---...-----D..A.....GMTLYGA..
  26 .....D....DYF..LPPLTG...D..IAAALSVLL---...-----N..D.....GLTLYGA..
  27 .....V....YYY..MPIPKN...D..TPKNIEKMKEKI...REILKE..N.....VAI---H..
  28 .....S....FFI..TPCCTV...D..VEITKELLAKYK...KWMILS..K.....SFL---D..
  29 .....L....TML..LPPLGK...K..KNITQAMIKCFE...VMNANN..S.....SPYYSRI..
  30 .....L....SML..LPPLGR...S..ENVYRAIFKCFD...IMNQNN..Ss12heTILEGFM..
  31 .....CptqkVIF..APITKP...N..QPDDFLDLIKGQ...IEQLDN..L.....QAIYIDD..
  32 .....CptqkVIF..APITKP...N..QPDDFLDLIKGQ...IEQLDN..L.....QAIYIDD..
  33 peypkC....RCL..LLPLSP...F..REVTPPELAELA...RRHCLS..T.....FCFIPES..
  34 .....L....SML..LPPLGK...L..CNLKKAIEKCFN...AMNENN..Tk12agSILEKFA..
  35 .....P....FMM..LTSIPH...P..KVSSEIIFFLNT...GYFLFP..-.....-------..
  36 .....F....IIFayFDAKKY...D..WTTLIPIALEAL...KTNFKK..E.....FLLAING..
  37 ed9niT....VIS..PIVSKY...E..KTLIKEYYLKSL...SLIESD..L.....KKCKYCG..
  38 .....V....YYY..MPIPKN...D..TPENIEKMKEKI...REILKE..N.....VAI---N..
  39 .....-....---..------...-..------------...------..-.....-------..
  40 .....K....LIF..MGEPVG...N..MDYLKDAIKELMtqaDYYGYE..L.....VFYEINS..


       100            110          120       130       140       150   
        |              |            |         |         |         |   
   1 ..NMR.....ADLEAILPERF...IFTEDRAYADYIYLRSDLATLKGKKFQAKRNHINRFRNTY.
   2 ..CMR.....EDLEAIMPGQF...GFTVDRDYADYIYLRSDLATLKGKKFQSKRNHINKFRNTY.
   3 ..CMR.....EDLEAIMPGQF...GFTVDRDYADYIYLRSDLATLKGKKFQSKRNHINKFRNTY.
   4 ..NMR.....ADLEAILPERF...IFTEDRAYADYIYLRSDLATLKGKKFQAKRNHINRFRNTY.
   5 ..EMK.....DELERLMPEKF...EFIYNRDRSDYVYLTEELIELKGRKFHKKKNHLNRFFELY.
   6 ..ENM.....ATLKELYPEHF...EYEEMRDSFDYVYQAEKLATLAGRKLQAKRNHINRFEANH.
   7 ..ENI.....IVLNSLFPESF...EYKEMRDSFDYVYLLDKLVTLSGNKLHSKRNHINRFKEKH.
   8 ..PDT.....AQWLQELDPEL...ALMPDRNNFEYVYRASDLAELPGKKYQKIRSHLNRFRKNC.
   9 ..PDT.....ALWIRELEPDL...ELVPDRDNFEYVYRASDLAELPGKKYQKIRSHLNRFRRNC.
  10 ..QKT.....IDMLTQCGMKF...ESLLERDLSDYVYKVQDLVQLKGKKYHAKKNHINKFLRLY.
  11 ..EFV.....KDFKELYDNNF...TIEEDRDNADYIYLKEDLKNLSGKKFHSKKNHYNAFIKNY.
  12 ..ETA.....KCMKE-IDPDL...ILVPDLNHFEYVYRAFDLAELPGKKYLKIRSQLNKFRKNY.
  13 ..NEV.....EELESYFPHTF...EITQRRDRFDYVYNVEELITLSGRKFHKKKNHLNRFWLTY.
  14 ..QLA.....DLWQAALGDGV...QVQEDRDQWDYLYDAEKLATLSGNKYHKKKNHVNQFKKQY.
  15 ..EQK.....DDLKDNFVGVF...DFTYNRDRSDYVYSIEELIALKGKKYHKKKNHLNQFLTNH.
  16 ..ELA.....SLWREVLGDRV...TVQETPGQWDYLYDSADLADLKGNRFHRKKNHVNGYAKAY.
  17 ..MLC.....SLLQEILPRKI...NIEETPGQWEYIYSTKDLTTLSGRRFDSKRNHLNSFFREY.
  18 ..EVV.....EFLKEKYPGRF...EYIEERDLFDYIYDAESLRTLAGKKNQKKRNHINYFLKEY.
  19 ..GQK.....DDLKDNFVGVF...DFTYNRDRSDYVYSIEELIALKGKKYHKKKNHLNQFLTNY.
  20 ..DIH.....RCIEEHCSAEY...YFIEDEAYCDYIYERESLATLSGKKLQAKRNHINKFVSLY.
  21 ..EQK.....DDLKDNFVGVF...DFTYNRDRSDYVYSIEELIALKGKKYHKKKNHLNQFLTNH.
  22 ..PWQ.....YSWMREHYPTL...KLKPDREFFDYVYKSEILASLPGQDFLSVRKQLNKFRRKC.
  23 etPFL.....EQLHENFGNLV...TSHEDKNNFDYIFNSKDLIKLSGKKYHRKKNQYNQFIKKY.
  24 ..DDT.....FLERHGADAAI...TVEEDRDGFDYLYLRSDLADLPGNRFHKKKNRINYFAARH.
  25 ..DEP.....FVSRYLAVGGV...AVEEDRDAFDYLHLRQALAELPGNRFHKKKNRINYFTARH.
  26 ..DEP.....FVERYFQGGNV...DVAAERNSFDYLHLRSEMAELPGNRFHKKKNRINYFARRH.
  27 ..YFT.....EYWYEKLKDDF...NLQEKRDYEDYIYSYESLSTLKGRHYAKKKNRVSNFKKSY.
  28 ..NNT.....NVFNLPFLKEL...KIEEDRDNFDYVYLRKDLAELKGKDFHKKKTHINKFEKSY.
  29 ..DYVq12saDQANSMFEMLE...SYIVEKKLVDYVYEVDALIDLRGNSYHTKRTEINKFMKSY.
  30 ..NYI.....EEGAMLFDSME...SYVVEKKLVDYVYRCDDLIELKGNAFHAKRNEINKFKNAN.
  31 ..LTG.....IELEWVKSKYD...VEIIHESSTNFLYETKKIMTLSGKSLQKKRNHLNFFIKQY.
  32 ..LTG.....IELEWVKSKYD...VEIIHESSTNFLYETKKIMTLSGKSLQKKRNHLNFFIKQY.
  33 ..YVE.....HFGLSSIRTLF...SLTEQPDYSDYIYLKKDLTELQGKRYLKKRNHINYFRRIFl
  34 ..AQI.....ENGASIFDAFE...EYIFEKQLVDYIYKSDDLIELKGNSYHTKRTEINKFKNTY.
  35 ..-IP.....EEWNLLFDFPL...DFSFEDADSDYLFKVEKLAFFSGRHLSKKRNLVKQLFDRY.
  36 ..IQD.....ENYLNNLSQFN...FELIYSWYSNFIYETQSLKYFCGKILQKKRNNLNFFIKNF.
  37 ..ELQ.....FGTFNQNDFNIfkkIELLDTFNSAYLYPTEQLKYMAGKKMQKKRNFINFYKKNY.
  38 ..YFT.....EYWYEKLKDDF...NLQEKRDYEDYIYSYESLSTLKGRHYAKKKNRVANFKKSY.
  39 ..---.....-----------...----------------------------------------.
  40 ..KLT.....MLLHDLGFD--...--FIKNGEEGYVTL--KDFSLSGKKKRGERALINKFEREG.


                 160       170          180              190       200 
                  |         |            |                |         | 
   1 ..P..D..YEYTPITPDRIQECLDLEAEWCKVN...NCDQ..Q.....EGTGNERRALIYALHNF
   2 ..P..D..YKYSPITKDRIQECLELEAKWCKAN...DCDQ..Q.....EGTGNERRALIYALNHF
   3 ..P..D..YEYSPITKDRIQECLELEAKWCKAN...DCDQ..Q.....EGTGNERRALIYALNHF
   4 ..P..D..YEYTPITPDRIQECLDLEAEWCKVN...NCDQ..Q.....EGTGNERRALIYALHNF
   5 ..P..D..FSYESLSMENVDELLEAWKLWFGRI...ADEA..N.....EGLKNEYIGIVETLKHF
   6 ..I..-..WAFELLTPENLAECWEMNLEWCRRN...DCKD..D.....EQLRAEYCAVKRDFDYF
   7 ..V..-..WSFEQISSDNLAECWEMNVIWCKEN...GCHE..D.....KQLADENCAVCRCFNNF
   8 ..S..-..STVEPVTPGNLKEVIKFLKKWSEWK...GCRK..N.....LVLASEVGAARYAVEHF
   9 ..M..-..STVEPITPENLEEVMELLKKWRDWK...GCDK..N.....PVLSHEVEAAFYAVEHF
  10 ..Gq.R..YEVKKIDDEIVRLCWDFECEWYEKR...NGQN..D.....VGLTFEKLAIERAIKNF
  11 ..E..-..YRTAKITESIANECLNTAMEWCRQN...DCKG..-.....-YLLHEISGIEDVLKNF
  12 ..R..-..HTVEPITSENREEIMEFLVKWCESK...RCKN..N.....FTLAHEIEAFSYAVEHL
  13 ..P..Q..TQYESFSNANLTEVLKVNNMWFEAG...N-SE..D.....KGLYFENLGINDALSHF
  14 ..D..-..WQYHPMTADCIEAVLQLQQEWCLSR...ECEE..S.....ETLLAENEAVIRVLEYW
  15 ..A..N..FVYEKISPQNRKEVLEASKAWF-LE...SQTD..D.....IGLINENKGIQSVLENY
  16 ..G..-..IDYHPLTPDCIEAVIEMQEEWCQWR...ECAE..S.....ESLLAENEAVIRVLEEW
  17 ..K..-..EDYRPIGDSNILELIEFQKEWYKWR...ECKK..S.....PSLAAEGEVLCDIFKNW
  18 ..Ag.R..YEAKLLDKENFDECLVLMKEWESNK...EENNefD.....ESMDDELIGIKKIFNHY
  19 ..A..N..FVYEKISPQNKKEVLEAFQAWF-LE...SQTN..D.....IGLINENKGIQSVLENY
  20 ..P..D..YTYDPVKDSDAEECLMLAHLWLDSR...GDQD..G.....REL--EVEMVERAFRHR
  21 ..A..N..FVYEKISPQNKKEVLEASQAWF-LE...SQTD..D.....IGLINENKGIQSVLENY
  22 ..P..-..STVELISESNMDEVLEFLVKWCQQR...ECDK..Y.....TILKHEKEAINEAVQYF
  23 ..D..Y..RIEEIQSPEVIKNCIDLSLKWYDYK...SLQS..-.....EQLKNEQKAIFDIFSNI
  24 ..P..-..FEVRVFGPDHRQGCLALLDEWRRVR...DAAG..S.....TSLDPETAAAAEAVTLS
  25 ..S..-..FSVVLYGEAHRDGCLALLDEWRRVR...NGID..S.....PSLELETKAGAEALMLA
  26 ..A..-..YQVELYADSHREGALQLLDEWYRVR...SEVA..S.....GSLLPETEATRDALAMA
  27 ..Q..-..FSYESISKDNINEVVAFQKKWYEIH...SESS..E.....EILKNENEGILNLLKNY
  28 ..D..K..IKIEPLTLENVEDAKKVLEEWNSTK...PDSN..P.....EN--SDYEAALEALSIL
  29 ..P..D..YVIEKLDSAKHKDEIMHLFNKWVSD...RVKY..Mpk9flEGIHQERHAIKQMIKNY
  30 ..P..D..FRIERLDSRKHEEEITLLFNKWVGD...RIKY..Mpk9flDGIYQERLAIKRMLKDY
  31 ..Ek.D..AKIKINREVDLNQLEKFYLTWI--N...DCED..P.....SAYQSELALFRAIKPLI
  32 ..Ek.D..AKIKINREVDLNQLEKFYLTWI--N...DCED..P.....SAYQSELALFRAIKPLI
  33 etG..R..TTIEALSPVNIPDTLLFLDRWCAKDsrcNPET..D.....PNLGQESQAARLMLENL
  34 ..P..N..FKIETLDPKAHREIIIDLANKWAAE...RIKY..Mpa9flEGIYQEKAAIKRMLDHY
  35 ..Q..-..IKTAQLTQKNKSDALKILVNWQDQQ...TQQE..Q.....T----DYFSCLEAIKLL
  36 ..Kn.-dyEIIKYNPKFHLHEVCTFLKEWDVKN...FINS..K.....RMLVNSNSDLLLNTQTN
  37 ..Es.E..SRIEKFNPELKQEIIDFCSKVSIDK...ENQE..T.....REYEID---ALKKILEF
  38 ..E..-..YSYGSINKNNINEVVDFH-------...----..-.....-----------------
  39 ..-..-..-------------------------...----..-.....-----------------
  40 ..YtfE..MIEPPFSKELIQELKQVSDSWLDGQ...LEKGf.S.....LGFFDEYYLNQAN----


              210       220        230       240       250          260
               |         |          |         |         |            |
   1 EAL..GLTGGILHVNGKIVAFTFGMPI.NHETFGVHVEKADTSIDGAYAMINYEFANRIPE...Q
   2 EEL..GLTGGILHVNGQIVAFTFGMPI.NKETFGVHVEKADTSIDGAYAMINYEFANHIPE...Q
   3 EEL..GLTGGILHVNGQIVAFTFGMPI.NKETFGVHVEKADTSIDGAYAMINYEFANHIPE...Q
   4 EAL..GLTGGILHVNGKIVAFTFGMPI.NHETFGVHVEKADTSIDGAYAMINYEFANRIPE...Q
   5 GKM..SYKGGILRVKGKIVAFTLGEQL.NSDTVVVHIEKADTEYHGAYQAINQQFLANEWS...H
   6 TDL..ELEGGLLRADGRIVAFTMGERL.NSDTYVVHVEKAFGEIQGAYQMINREFVRWIREtypD
   7 NEL..GLEGGLIRLNGRVIAYTMGEKL.NSNTYVIHIEKAFSKIQGAYQMINREFAAFIQEkypQ
   8 NEL..PLQGLLIRVDSEIGAITLYERL.NTDTALIHFEKGLPDCEGIYKAINEETAAVLVS...E
   9 MEL..RLRGFLLRVDSEVGAISIFERL.NADTALIHFEKGLPDCEGIYKAINAETAAALAD...E
  10 DKL..SYEGMIVFIDGKIKAFTFGEPL.NKNTVVIHIEKADPDIEGLYTFVNNKFLIEFWQ...N
  11 DKL..DVMGMAVYVNDKLSAFTLGEKV.NSDMAIIHIEKADVNVRGLYPFINRTFIEEYLD...D
  12 TEL..PLRGLLIRVDSQVGAISLFERL.NANTALIHFEKGLTDYEGIYKAINAETAAVLAS...E
  13 DKL..SLRGGLLRCDGEIIAFSFGEEI.DDDLALIHIEKANIAFSGAYQAINQALLKNEFS...N
  14 DTIp.GLKGGALYVNDVMVAYTVGEAL.TDDTLVVHFEKARSEYRGVYQAINQIFVEHEGT...G
  15 ESL..DLKGGLIRVNGEIVSFSFGEVL.NEESALIHIEKARTDIAGAYQIINQQLLLNEFS...H
  16 DSIp.GLVGGALYAEGRMVAYTVGEAL.DDETLVVHFEKGRGDYRGVYQAINQQFVQYEGA...R
  17 GLFp.SLRGGALYSNNKVIAFSIGETL.DENTVVVHFEKAKPGIRGAYQAINNCFVRYECN...D
  18 DILkdKVKVFGVYVDGKLEAFSIGELL.NPNMALIHIEKANPDIRGLYPFINQQFLVSEFK...D
  19 ESL..DVKGGLVRVNGEIVSFSFGEVL.NEETALIHIEKARADIAGAYQIINQQLLLNEFS...H
  20 QEL..GLSGGVLRVGGRVVAFCLGSPI.NTDTFGVHIEKADAMVEGAFAMINREFARSIPD...T
  21 ESL..DVKGGLIRVNGEIASFSFGEVL.NEESALIHIEKARTDIAGAYQIINQQLLLNEFS...H
  22 DQL..GFSGITVNPKGEIGGIAIFEEL.NPTTAVVHYEKALPDCEGIYKEVNIQTALYLKD...R
  23 KIFn.NIKGIAVYVNNEIAGFAIGEKL.NSKMATVHFEKGNYNFSGIYPFLNKSLVEIFFR...D
  24 AEL..GLEGVVIAVEGRVGAFALGERL.NRETAVCHFEKSDPFMEGISQLVNREFCR-LFT...D
  25 DRL..GLEGVVVLVEGGVAAFALGERL.NRDTSVCHFEKNDPFMEGVSQLVDREFNRLLFT...D
  26 GQL..GLAGVVVLVEGKVRAFVLGERL.NSDTSVCHFEKADPFLDGLNQLADREFNRLLFA...D
  27 EKL..GLKGGFLKVNNQVIAYSLGEAL.TDKMILVHTEKALIDYIGSYQAINMIYLQKEWQ...G
  28 SRT..SMMGIILYVWNEPVAWTLAEITqNNKTAVILFEKALASYKGSFQYINYAFAGYLPE...Y
  29 DEL..MLLGLVIYINGELKGFTVGERI.SHDTATVIIEKTDFEILGCAQFIFREFSKMLKEhy.E
  30 SEL..ELLGIVIYIKEDLKGFTVGEKI.DESTASILVEKTDFEVLGCAQFIFREFCKLLKNef.R
  31 QDG..SLKLTALYYLDQIIGFCVSYSL.NNRC-EIFIEHCDETYRGSYQYLLSNSLRIHHS...N
  32 QDG..SLKLTALYYLDQIIGFCVSYSL.NNRC-EIFIEHCDETYRGSYQYLLSNSLRIHHS...N
  33 ELL..EARGIAIRIDGEVCAFGIVTSL.TDKIKVLNFEKAYSHIRGLYQFLDRECACRLFE...D
  34 EKL..ELIGIVLFIDDEIKGFSVGEKI.NDGVASVIIEKTDFATLGSAQFIFREFSKVLKNiy.N
  35 ECL..NLEGVIIYIDGKPAGFTIGEYL.TPTCFVIHFAKGDANIHGLYQYLYQYQAQILSK...Q
  36 PYF..MGSLLIKKSINKIVGFTLVY-T.RPNIAEILIEQTDREIRGMYQYLLSQNLIINNI...N
  37 NPN..SSYGSTLFYKNKIVGFTYGF-I.NNDKYEIFIEKGDKELKGIYQYLLSKNLEINNI...Q
  38 ---..----------------------.---------------------------------...-
  39 ---..----------NQIIAYSLGEAL.TDKMVLVHTEKALIDYIGSYQAINMIYLQKEWQ...G
  40 ---..--ISIIKDADNKIVAFASMMPM.DDKTLSI--------------------------...-


             270       280       290       300     
              |         |         |         |     
   1 YIYINREEDLGIEGLRKAKLSYQPVTILEKYMACLKDHPMDMVRW
   2 YIYINREEDLGIEGLRKAKLSYHPETILEKYMACLKEQPVEMIKW
   3 YIYINREEDLGIEGLRKAKLSYHPETILEKYMACLKEQPVEMIKW
   4 YIYINREEDLGIEGLRKAKLSYQPVTILEKYMACLKDHPMDMVRW
   5 LTYVNREEDLGIEGLRRAKLSYQPSHLIDKYNVTPK---------
   6 MIYVNREEDMGYEGLRKAKLSYHPDKMEEKFLA------------
   7 LMFVNREEDMGYEGLRKAKLSYYPYRMEEKFM-------------
   8 VEYINRESDLGVGGLREAKLRYHPHHMIEVYSLKRPNCASGV---
   9 VEYINRESDLGVGGLREAKLRYHPHHMVEVYSLKRP---------
  10 FEFVNREEDLGKEGIRKAKMSYHPFKFAEKFTV------------
  11 ITYINREQDLGIEGLRKSKLSYNPYKLEMKYC-------------
  12 VEYINRESDLGASGLRKAKLRYHPHHMVEVYSLK-----------
  13 HRYVNREEDLGIEGLRKAKLSYQPSFLLEKYDAR-----------
  14 YTYVNREQDLGDEGLRKAKLTYHPADWLRKSTV------------
  15 LTYANREEDLGLEGLRRSKMSYNPVFLIDKYEA------------
  16 FRLVNREQDLDDEGLRKAKQSYYPVDYLRKATVR-----------
  17 FDFINREQDLGEEGLKKAKQSYYPIGFLKKNYV------------
  18 VEFVNREEDLGIEGLRKAKLSYHPCRFVEKYSV------------
  19 LTYANREEDLGLEGLRRSKMSYNPVFLIDKYEAV-----------
  20 FRYINREEDLGLPGLRQAKLSYRPAILLPKQTAILR---------
  21 LTYANREEDLGLEGLRRSKMSYNPVFLIDKYEAV-----------
  22 YHYINRESDMGIPGLREAKERYHPDHMVKLYY-------------
  23 VEFINLQEDLGLEGLRRAKSAYQPIKLEKKYLV------------
  24 CTFVNREQDLGEPGLRTAKLSYHPVELVRKFWLR-----------
  25 CTWTNREQDLGEPGLRAAKLSYHPDELVKKYRA------------
  26 CIYVNREQDLGEPNLRESKLSYHPVELIKKFKVR-----------
  27 YELVNREDDFGDEGLREAKMSYKPLYLQKKYS-------------
  28 IEFINREQDLGDEGLRQAKMTYKPIKFIKKYR-------------
  29 VAYINVGDDMGFENLRKVKMSYRPFKLVPKYTIY-----------
  30 VEHINVGDDMGFENLKKVKMSYRPERLIPKYTLY-----------
  31 DALTDRQDDMGSASISYSKLSYKPEFIIKRYLV------------
  32 DALTDRQDDMGSASISYSKLSYKPEFIIKRYLV------------
  33 VEFINKESDMGIPGLAGSKKSYFPVNRVRSYK-------------
  34 CDFINVGDDMGFENLKKVKMSYRPNHLEIKYSIYQ----------
  35 TEWINLEQDLGLPFLRQAKHSYVPDRMILKQRARDKN--------
  36 NWLIDRQDGAWSDNISASKLSYAPKIITKRVNVLI----------
  37 TKLVDRQDDMYSENLAQSKQSYKPSEVIKMY--------------
  38 ---------------------------------------------
  39 YELVNREDDFGDEGLREAKMSYKPLYLQKKYSI------------
  40 ---------------------------------------------